Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3032 ATGTATAACATTCGTATATACGCACAGTACCACTCGTCGTGCCTTGATTTCTCTTATTACTCCGTCCATTCCATGGCGTCCATGATCGCACCACTCTTCCTCGTTATCGTCTCCgccctccttctcttcctccaCCGGCGATCCCGCTGCCGGCGGCTCCGGCTCCCGCCGGGGACCCTGGGCCTACCCTTTCTCGGCGAGACCCTGCAGCTGATATCCGCCTATAAGACCGACAACCCGGAACCCTTCATCGACCAGCGCGTGAACCGGTACGGTCCAATCTTCACGACCCACGTGTTCGGCGAACCAACCGTGTTCTCCGCCGACCCGGAAACGAACCGGTTCATTTTGCTGAACGAAGGGAAACTCTTCGAATGCAGCTACCCCGGTTCGATATCCAACCTCCTCGGGAAACACTCCCTGCTCCTCATGAAGGGTTCTCTCCACAAGAGAATGCACTCCCTCACCATGAGCTTCGCCAACTCCTCCATCATCAAGGACCATTTACTCGTCCACATAGACCGGCTCATCCGGCTCAACTTGGATTCCTGGTCCGACCGGGTTTTTCTCATGGAAGAAGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAGCTGATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTAAGGAAAGAGTACGTTCTTGTGATCGAAGGATTTTTCACCCTCCCCTTGCCTCTCTTCTCAACTACCTACCGCAGAGCCATCAAGGCTAGAACGAAGGTGGCAGAGGCATTAACGTTGATAGTGAGgcagagaagaaaagaaagcgTAACGGGGGAAAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCGACCACTTTTCCGACGAGGAAATAGTTGATTTTATGTTGGCTTTGCTCGTCGCCGGCTATGAAACCACCTCTACCATAATGACTCTTGCCGTCAAATTCCTCACCGAGACTCCTCTAGCATTGGCACAGCTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAGAGTTACCCAGAGGCACCACTGGAGTGGACAGATTATAAGTCAATGATATTTACTCAATGCGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATTGGTGGAATATTTAGGAGAGCAATGACAGACATCAACATAAAAGGTTACACTATTCCAAAGGGATGGAAGGTCTTTGCTTCATTTCGTGCTGTGCATCTAAACCCTGATCATTACAAAGATGCCCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAGCAACTAGCCCTGCGAATGTATATACCCCGTTTGGAGGAGGGCCACGGCTATGCCCTGGCTATGAGCTTGCCAGAGTGGTGCTCTCTGTCTTCCTTCACCGCATTGTCACCCGTTATAGTTGGTTTCCTGCAGAAGAAGATAAGTTAGTGTTTTTCCCAACTACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGAGGAGTCCAGACCAAATAAATCGCCATGA 1506 0.488 MYNIRIYAQYHSSCLDFSYYSVHSMASMIAPLFLVIVSALLLFLHRRSRCRRLRLPPGTLGLPFLGETLQLISAYKTDNPEPFIDQRVNRYGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVHIDRLIRLNLDSWSDRVFLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVRQRRKESVTGEKKNDMLGALLASGDHFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSYPEAPLEWTDYKSMIFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHYKDARTFNPWRWQSNSEATSPANVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREESRPNKSP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3032 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Ssu6g3032 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PANTHER CYTOCHROME P450 26 31 491 - -
Ssu6g3032 501 Gene3D Cytochrome P450 45 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PANTHER CYTOCHROME P450 90A1 31 491 - -
Ssu6g3032 501 SUPERFAMILY Cytochrome P450 48 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 Pfam Cytochrome P450 56 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3032 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3032 Ssu-Chr6 69424832 69431931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3032 144 493 Cytochrome P450 AT5G05690 81.766 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3032 K09588 - gmx:100775886 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3032 6 69424832 69431931 Ssu6g3032 6 69424832 69431931 ECH
Ssu9g1583 9 52133384 52138832 Ssu6g3032 6 69424832 69431931 PCT