Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2978 ATGGTGTCTTTAAGGCCATGCCTTCTTTTCATTCTTCTCTTCATTGCGATAATTAATCATGCGCATTCCAAGAATGATCGGAAGACCTACATTGTTTATATGGGTGATCATCCTAAGGGCATGGACTCCACTTCCATACCTTCTCTTCATACGGCCATGGCTCAACAAGTCCTTGGCAGCGATTTCAAACCAGAAGCTGTACTTCACAGCTACAAGAACTTCAATGCATTTGTCACGAAGTTAACAGAAGAGGAGGCTGAAAAAATGGCAGAAATGGACAACGTTATCTCTGTTTTCCCAAACACCAAGCACCGTCTTCACACAACAAGATCGTGGAACTTCATTGGCTTTCCCCAGAATGTCAAAAGAGCAACTACAGAGAGTGACATAATTGTCGGAGTATTGGACTCGGGAATTTGGCCGGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCTTCCACCAAGCAAATGGAAAGGATCATGCCATAACTTTACCTGCAACaaCAAAATAATTGGCGCAAAGTACTTCAATCTGGAACATGAGTTTGCCAAAGATGATATCATATCTCCTAGAGATGCAGACGGTCACGGATCACACTGTGCATCCACAGCTGCTGGAAACTCAGTTAACTCTGCAAGTCTATTTGGGTTGGCCTCAGGGACAGCCCGTGGAGGAGTTCCATCAGCCCGAATTGCTGTGTACAAAATATGTTGGAAGGATGGTTGTAGTCATGCTGACAATCTTGCAGCATTTGATGAAGCTATTACAGATGGAGTTGATATCATTTCTCTTTCGGTCGGACCAGCTGAAGTAGTGCACTATCCGTATTTTAAAGATCCAAATAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGACGTCAAATGCTGCCGGTAATGAAGGTCCCTCTCTTTACACTATGTCAATTTATCCACCATGGTTACTGTCTGTGGCTGCTAGTAGTTTTGACAGAAAGATTGTTACCAAGGTGCAGTTGGGCAATAGGGCGGTTTATGAGGGGATTTCAATTAACACATTCgatcttaagaaaaaaatgtatccACTGATTTACGGTGGAGATATACCTAACATTGCTGGTGGACATAACAGCTCCACATCGAGGTATTGCTTAAAGGACTCTTTGGATAAACATTCAGTGAAGGGAAAGATTGTTCTCTGTGAAATCACCGCAGACGTGGAGTTTTTATCTGGGATTGGGGCAGTTGGTGTTATATTTGGACTTAATTACCCTAAAGATTTGCTCTCAGCATATTCCCTGCCTGCTGTGGAGCTCACCCAGTGGGACCAAAGACTCATACAGTCTTACGTAACTTCAGCGAGAAATGCAACAGCTACAATATTTAAGAGTGAAGAAATAAATGATGGGCTAATACCTTTCATAGCTTCATTCTCATCAAGAGGTCCAAATCCAATCACACCAAATACTCTAAAGCCTGACATCGCTGCCCCAGGAGTTGATGTTATAGCTGCATGGTCTCCAGTTGACCCAATTTCAGGTGTTAAAGGTGACAAAAGAACTGTGCAGTATAATGTAATCTCTGGCACTTCAATGGCTTGCCCTCATGCTACTGCAGTAGCTGCATATATCAAATCATTTCATCCCAATTGGTCTCCTGCTATGATCAAGTCTGCATTGATGACCACTGCTTTTCCAATGAGTCGTACTCTTAATCCTGAAGCTGAATTTGCATATGGAGCAGGACTAATTAATCCTGTTAAGGCCACAAATCCTGGTTTAGTATATGATATTAACGAAGCAGATTATATCAAGTTCTTGTGTGGAGAGGGGTATACAGATAAAGAGCTTCGCCTCCTTACTAAGGATCATAGCACTTGTAGAGGACAAGCTAACAAGAAAGCTATATACGAATTAAACCTCCCATCATTTGCTCTTTTTGTTAACAGCTCAGATTTTAGTCGTGCTTATCGTAGAACGGTTACAAATGTGGGATCAGCAACATCTACTTATAAAGCCAGGGTAATTGCTCCATCTTTATTACAAATTCAAGTGAAACCCAACACTCTTTCCTTCACATCTGTAGggcaaaaaaaatcattttacgtCATAATTGAAGGGAGGATAAATGTGCAAATAGTCTCTGCTTCTTTGATTTGGGATGATGGCAATCATCAAGTTAGAAGCCCAATTGTAGTGTACGGGCGTGTACCAAATAGTTGA 2208 0.4103 MVSLRPCLLFILLFIAIINHAHSKNDRKTYIVYMGDHPKGMDSTSIPSLHTAMAQQVLGSDFKPEAVLHSYKNFNAFVTKLTEEEAEKMAEMDNVISVFPNTKHRLHTTRSWNFIGFPQNVKRATTESDIIVGVLDSGIWPESESFSDKGFGLPPSKWKGSCHNFTCNNKIIGAKYFNLEHEFAKDDIISPRDADGHGSHCASTAAGNSVNSASLFGLASGTARGGVPSARIAVYKICWKDGCSHADNLAAFDEAITDGVDIISLSVGPAEVVHYPYFKDPNNIGSFHAMKRGILTSNAAGNEGPSLYTMSIYPPWLLSVAASSFDRKIVTKVQLGNRAVYEGISINTFDLKKKMYPLIYGGDIPNIAGGHNSSTSRYCLKDSLDKHSVKGKIVLCEITADVEFLSGIGAVGVIFGLNYPKDLLSAYSLPAVELTQWDQRLIQSYVTSARNATATIFKSEEINDGLIPFIASFSSRGPNPITPNTLKPDIAAPGVDVIAAWSPVDPISGVKGDKRTVQYNVISGTSMACPHATAVAAYIKSFHPNWSPAMIKSALMTTAFPMSRTLNPEAEFAYGAGLINPVKATNPGLVYDINEADYIKFLCGEGYTDKELRLLTKDHSTCRGQANKKAIYELNLPSFALFVNSSDFSRAYRRTVTNVGSATSTYKARVIAPSLLQIQVKPNTLSFTSVGQKKSFYVIIEGRINVQIVSASLIWDDGNHQVRSPIVVYGRVPNS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2978 735 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Ssu6g2978 735 Pfam Fibronectin type-III domain 633 728 IPR041469 -
Ssu6g2978 735 CDD PA_subtilisin_like 333 456 - -
Ssu6g2978 735 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Ssu6g2978 735 Gene3D - 602 731 - -
Ssu6g2978 735 SUPERFAMILY Subtilisin-like 106 589 IPR036852 GO:0004252|GO:0006508
Ssu6g2978 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Ssu6g2978 735 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Ssu6g2978 735 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Ssu6g2978 735 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Ssu6g2978 735 CDD Peptidases_S8_3 104 559 IPR034197 -
Ssu6g2978 735 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Ssu6g2978 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Ssu6g2978 735 Gene3D - 326 463 - -
Ssu6g2978 735 PANTHER PUTATIVE-RELATED 19 729 - -
Ssu6g2978 735 ProSiteProfiles Serine proteases, subtilase domain profile. 111 585 - -
Ssu6g2978 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 729 IPR045051 -
Ssu6g2978 735 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2978 Ssu-Chr6 68373998 68378535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2978 7 729 Subtilisin-like Serine Gene Family AT3G46850 47.773 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2978 - - gmx:100815516 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2978 6 68373998 68378535 Ssu6g2978 6 68373998 68378535 ECH