Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu6g2976 | ATGATAGCCGCTGCAAGCGACGCATTATATGCGAATGGAGCTGCATGTGGTCAAATGTATAAGATCACATGCACAGGTGCTACCAACCAGGGTGTGCCTCAGCCATGCAAGGGTGGCAGTGTTACGGTCAAGATTGTGGATCGTTGCCCTTCCCCAGGTTGCCAAGCCACCATTGATCTCTCCCAAGAAGCTTTCACTGCAATCGCTGACCCCAATGCtggaaaaattcaaattgactaCACAAAGGTGTGA | 252 | 0.4762 | MIAAASDALYANGAACGQMYKITCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFTAIADPNAGKIQIDYTKV | 83 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu6g2976 | 83 | PANTHER | EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED | 1 | 83 | IPR044206 | GO:0009627|GO:0048046 | |
Ssu6g2976 | 83 | Gene3D | - | 1 | 83 | IPR036908 | - | |
Ssu6g2976 | 83 | SMART | dpbb_1 | 2 | 80 | IPR007112 | - | |
Ssu6g2976 | 83 | SUPERFAMILY | Barwin-like endoglucanases | 1 | 83 | IPR036908 | - | |
Ssu6g2976 | 83 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 1 | 83 | IPR007112 | - | |
Ssu6g2976 | 83 | Pfam | Lytic transglycolase | 3 | 80 | IPR009009 | - | |
Ssu6g2976 | 83 | PANTHER | EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 | 1 | 83 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu6g2976 | 1 | 82 | Expansin Gene Family | AT2G45110 | 34.409 | 8.80e-10 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu6g2976 | - | - | vra:106764512 | 163.31 |