Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2975 ATGATTTCTCTAGGCTGGTCACATCTCCTCCAAATTCTTACATGCATTCTGCTTTTAACTCAATCAATTTCTGGAGATGATCGACAgACTTACATTGTTTACATGGGCCATTATCCCAAAGGCATGGAACTTCCAGAATTACTTCACACTAGTATGGTTCAAAGTGTTCTCGACAGCAAATTTGCACCAGATGCTTTGCTGCATAGCTACAAGAGTTTTAACGGATTTGTCGCGAGACTAACAAATCAAGAATCATTGAGAATGAGAGGAATGGATGGTGTGGTCTCTGTTATACCAACTGCAAACCATGAACTCCAAACAACATTGTCTTGGGACTTCCTTGGCTTCccccaaaatgtcaaaagaacAAGTCTAGAAAGCGACATAATCGTTGGAGTAATTGATACTGGAATTTGGCGTGATTCTGATAGCTTTAATGATGATGGATTTGGTCCACCACCACAGAAATGGAAGGGCAGTTGCCAGAACTTCACTTGCAATAAGCTTTGCGGTGAAAATTCGTTAGATGAAGCTTTAGTGAAgggaaaaattgttttatgcGATGGCTATCGAGAGGTGGGATTTGCTTCTGGGGCAGCTGGAATCATATTTCAAAGTAATGGTTCGAAAGTTGTGGCAGATATATTTGCACTGCCAGCGGTTCACATTAGCCATAATGACGGGAACCTCATATATTCTTACATCAAGTCAACAAGAAATCCTGTAGCTACTATATTTAAGAGTAACCAAGGCAAGGATGCATCAGCCCCTTACATAGCTCCCTTCTCATCTAGAGGTCCAAATGCAATCACTCCAGACATTCTTAAGCCTGATATAGCTGCTCCAGGAGTTAACATTCTAGCTGCTTGGCCTCCAAAGGCTCCTATTTCTGGTGTTAAAGGAGATAGTAGAATGGCAAAGTATAACCTACTTTCTGGCACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGTCTACGTTAAATCATTTCATCCTAATTGGTCTCCTGCAGCAATTAAATCAGCGCTAATGACAACTGGTAATGATCCCCTTGGTTCTaacataaatttcaatcattctatccttttttttgttcataCACTACGTTTGGTACACCAGTAA 1125 0.3884 MISLGWSHLLQILTCILLLTQSISGDDRQTYIVYMGHYPKGMELPELLHTSMVQSVLDSKFAPDALLHSYKSFNGFVARLTNQESLRMRGMDGVVSVIPTANHELQTTLSWDFLGFPQNVKRTSLESDIIVGVIDTGIWRDSDSFNDDGFGPPPQKWKGSCQNFTCNKLCGENSLDEALVKGKIVLCDGYREVGFASGAAGIIFQSNGSKVVADIFALPAVHISHNDGNLIYSYIKSTRNPVATIFKSNQGKDASAPYIAPFSSRGPNAITPDILKPDIAAPGVNILAAWPPKAPISGVKGDSRMAKYNLLSGTSMACPHVTAAAVYVKSFHPNWSPAAIKSALMTTGNDPLGSNINFNHSILFFVHTLRLVHQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2975 374 ProSitePatterns Serine proteases, subtilase family, serine active site. 313 323 IPR023828 -
Ssu6g2975 374 ProSiteProfiles Serine proteases, subtilase domain profile. 1 374 - -
Ssu6g2975 374 Gene3D Peptidase S8/S53 domain 128 166 IPR036852 GO:0004252|GO:0006508
Ssu6g2975 374 Gene3D Peptidase S8/S53 domain 253 350 IPR036852 GO:0004252|GO:0006508
Ssu6g2975 374 Gene3D - 167 252 - -
Ssu6g2975 374 Pfam Subtilase family 255 350 IPR000209 GO:0006508|GO:0008236
Ssu6g2975 374 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 131 141 IPR023827 -
Ssu6g2975 374 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 166 348 IPR045051 -
Ssu6g2975 374 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 167 IPR045051 -
Ssu6g2975 374 Pfam PA domain 170 230 IPR003137 -
Ssu6g2975 374 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Ssu6g2975 374 PRINTS Subtilisin serine protease family (S8) signature 312 328 IPR015500 -
Ssu6g2975 374 SUPERFAMILY Subtilisin-like 69 351 IPR036852 GO:0004252|GO:0006508
Ssu6g2975 374 Pfam Peptidase inhibitor I9 30 99 IPR010259 -
Ssu6g2975 374 PANTHER PUTATIVE-RELATED 166 348 - -
Ssu6g2975 374 PANTHER PUTATIVE-RELATED 19 167 - -
Ssu6g2975 374 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2975 Ssu-Chr6 68257302 68262485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2975 93 347 Subtilisin-like Serine Gene Family AT5G59100 40.602 9.09e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2975 - - pvy:116132518 282.337