Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2973 ATGATCTCTCTAGGCTTGTGGCATCTCTTTCAAATTCTTACATGTATCATGCTTTTGCCTCAATCATTTTCTGAAGATGTTCGAAAGACTTACATTGTCTACATGGGTGATCATTCGAAGGACATGAATTCCATAGAATTACTTCACACTAATATGGTTCAAAATGTCCTCGGCAGCAAATTTGCGCCAGATGCTTTGCTTTATAGTTACAAGAAGAGTTTTAATGGATTTGTCGCGAGGCTGACAAAAGAAGAAGCAACGAGAATGAGAGGTATGGATGGTGTGGTCTCCGTTTTCCCAAACAGAAACCACAAGATCGAAACAACAGAGTCCTGGGACTTCCTTGGCTTCCCCCAACATGTCAAAAGAACACCTACAGAAAGCGACCTAATTGTAGGAGTAATTGATACTGGAATTTGGCCTAAATCTGATAGCTTTAATGACAAAGGATTTGGTCCACCGCCACAGAAATGGAAGGGCACTTGTCAGAACTTTACTTGTAACAACAAAATAGTTGGAGCAAAATATTTTCgcactaagggtgtgtttggaaaaGACGACATATCTCCAGTGGATACGAGAGGTCATGGAACTCACTGTGCATCCACTGCTGCTGGAAACGCAGTTGGGTCTGCAAGTCTATTTGGGCTTGCCTCAGGAACAGCCAGAGGAGGAGTTCCATTAGCACGCATTGCTGTATATAAAGTTTGTTGGTCTTTGGGTTGTGAGGGAGCTGACATCCTTGCAGCCTTTGATGAAGCCATCGCAGATGGTGTTGACATCCTTTCTGTTTCAATGGGACCTTTGAAGGTTAGATACCCTAACTACTTTGAGGACATATACGCAATAGGAGCTTTCCATGCAATGAAGAGGGGCATATTAATGTCTAAAGCTGCTGGCAATCTGGGTTCAAAACCATTCACAATCTCAAATAATGCACCGTGGTTCATTTCTGTGGCTGCCAGTACTATAGACAGAAAGTTTTTGACCAATGTCCAGTTGGGGAATGGCAAGATTTATCAGGGAGTTTCAGTCAATACATTTGACCTCAAAAACAATAGCTATCCATTGATATATGCTGGAGATGCACCAAACATCACTGGTGGATATAATAGTTCCACGTCCAGGTCTTGCCCTGTAAATTCTTTGGATGAAGCTTTAGTGAAAGGGAAAATTGTTTTATGTGATGGCTATCGAGGTCCTTCTGTGGGATTTGTTTCTGGGGCTGCTGGTGTCATATTTGGAAGCCCTGACTCGAAGGTTGTAGCAAAGATATTTGCACTACCAGCGGCTCACCTTAGCCAAAATGACGGGACACTCGTATATTCTTACATAAAGTCAACAAATAATCCTACAGCTACTATATCTAAGAGTTATGAAGGCAAAGATCCATTGGCCCCTTACATTGCTCCATTCTCATCTAGAGGTCCAAATAAAATCACTCCAGACATTCTTAAGCCTGATTTAGCCGCTCCAGGAGTAAACATTCTAGCTGCGTGGCCTTCAATTGCACCTATTTCTAGTGTTCAAGGAGATAATAGAAGAGCAAATTACAACATATTATATGGCACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGTCTACATCAAATCATTTCATCCTAATTGGTCTCCTGCAGTAATTAAATCTGCTCTAATGACAACTGGTAATGGTCTCACTGGTACTCACGTAGATTGCAAACATTTTATCCCTTTTTCTATGACACAATTAAAAAACGGTActttgttaaaacttaaaaagcaGCTCTCTATCTCTCACCCCTAG 1791 0.407 MISLGLWHLFQILTCIMLLPQSFSEDVRKTYIVYMGDHSKDMNSIELLHTNMVQNVLGSKFAPDALLYSYKKSFNGFVARLTKEEATRMRGMDGVVSVFPNRNHKIETTESWDFLGFPQHVKRTPTESDLIVGVIDTGIWPKSDSFNDKGFGPPPQKWKGTCQNFTCNNKIVGAKYFRTKGVFGKDDISPVDTRGHGTHCASTAAGNAVGSASLFGLASGTARGGVPLARIAVYKVCWSLGCEGADILAAFDEAIADGVDILSVSMGPLKVRYPNYFEDIYAIGAFHAMKRGILMSKAAGNLGSKPFTISNNAPWFISVAASTIDRKFLTNVQLGNGKIYQGVSVNTFDLKNNSYPLIYAGDAPNITGGYNSSTSRSCPVNSLDEALVKGKIVLCDGYRGPSVGFVSGAAGVIFGSPDSKVVAKIFALPAAHLSQNDGTLVYSYIKSTNNPTATISKSYEGKDPLAPYIAPFSSRGPNKITPDILKPDLAAPGVNILAAWPSIAPISSVQGDNRRANYNILYGTSMACPHVTAAAVYIKSFHPNWSPAVIKSALMTTGNGLTGTHVDCKHFIPFSMTQLKNGTLLKLKKQLSISHP 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2973 596 Gene3D Peptidase S8/S53 domain 129 562 IPR036852 GO:0004252|GO:0006508
Ssu6g2973 596 SUPERFAMILY Subtilisin-like 108 562 IPR036852 GO:0004252|GO:0006508
Ssu6g2973 596 CDD PA_subtilisin_like 331 455 - -
Ssu6g2973 596 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Ssu6g2973 596 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 561 IPR045051 -
Ssu6g2973 596 Gene3D - 325 462 - -
Ssu6g2973 596 PANTHER CUCUMISIN-LIKE 40 561 - -
Ssu6g2973 596 ProSiteProfiles Serine proteases, subtilase domain profile. 111 596 - -
Ssu6g2973 596 ProSitePatterns Serine proteases, subtilase family, histidine active site. 196 206 IPR022398 -
Ssu6g2973 596 Pfam Peptidase inhibitor I9 30 104 IPR010259 -
Ssu6g2973 596 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 106 IPR037045 -
Ssu6g2973 596 CDD Peptidases_S8_3 104 557 IPR034197 -
Ssu6g2973 596 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Ssu6g2973 596 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Ssu6g2973 596 PRINTS Subtilisin serine protease family (S8) signature 192 205 IPR015500 -
Ssu6g2973 596 Pfam Subtilase family 128 559 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2973 Ssu-Chr6 68149076 68155363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2973 28 558 Subtilisin-like Serine Gene Family AT5G59100 50.278 3.89e-174 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2973 - - gmx:100800042 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2973 6 68149076 68155363 Ssu6g2973 6 68149076 68155363 ECH