Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2972 ATGTTTTACaaccaatttaatttgtttgttctCTTATTGATAGCTACCTCTATGAGTTCTGCACTTAATGAAGAAGCCGAGTTTGCTTATGGTGCGGGGCAAATCAATCCCATCAAGGCAATAAATCCTGGATTAGTTTATGATGCTACTGAAATCGATTATGTCAAGTTTTTGTGTGGACAAGGTTATGATACAAAAGATCTTCAAAAAATTACTGGAGATAATAATAGCAGTTGTACACAAGAAAATAATGGAACTGTTTGGGACCTTAATCTCCCATCTTTTGCCCTTTCCACAACTCGCTCAACGTATACTAATGTCACTTTTCACAGAACTGTTACAAATGTAGGATCAGCTACATCCAGATATAACGCTAAAATAGCTACACCTCCATCTACGTTAAACATCCGAGTAGTGCCAGATGTTTTGGTCTTCTCATCTTTGCATCAAACAAAGTCATTCACGCTTAAGATTGAAGGGAGCATTAATGCAAGTATAGTTTCTTCATCTTTGGTTTGGGATGATGGCACTTTTAAAGTAAGGAGTCCCATTGTTGTTTATTACTGA 567 0.3563 MFYNQFNLFVLLLIATSMSSALNEEAEFAYGAGQINPIKAINPGLVYDATEIDYVKFLCGQGYDTKDLQKITGDNNSSCTQENNGTVWDLNLPSFALSTTRSTYTNVTFHRTVTNVGSATSRYNAKIATPPSTLNIRVVPDVLVFSSLHQTKSFTLKIEGSINASIVSSSLVWDDGTFKVRSPIVVYY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2972 188 PANTHER PUTATIVE-RELATED 11 186 - -
Ssu6g2972 188 Gene3D Peptidase S8/S53 domain 14 54 IPR036852 GO:0004252|GO:0006508
Ssu6g2972 188 Gene3D - 58 188 - -
Ssu6g2972 188 Pfam Fibronectin type-III domain 89 186 IPR041469 -
Ssu6g2972 188 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 186 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2972 Ssu-Chr6 68146864 68147430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2972 19 187 Subtilisin-like Serine Gene Family AT3G46850 47.674 7.68e-43 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2972 6 68146864 68147430 Ssu9g1533 9 51277834 51280757 PCT