Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2971 ATGGCAAATAgatcctcttctcttcttttgcTTCTTCTCCTTAGCTTTACTTCACTAGTGCTGAAATGTCACTCAACTTCACCAGATGACCTGAAgAATTACATAGTCTACACTGGCAACAACATGAAAGATGAAGCTTCCTTAATGTCCCTTTACAAAAGCATGCTACAAGAAGTTGCAGACAGCAATGCCGCACCTAAGTCTGTATTGCACCACTACCAGCGTAGTTTCAGTGGCTTTGTTGTGAAGCTAACAGAGAAAGAAGCTGATAGAATAGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATAGAAAGAAACAACTCTACACGACAAAGTCTTGGGATTTTATTGGCTTTCCACAACACGTGGAAAGAAAAAACGCAGAAAGTGACATTGTTATTGGACTAATTGACTCTGGAATCTGGCCAGAATCCGAGAGTTTCGATGATAAAGGATTCGGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAACCTCTAATTTCACTTGCAACAATAAAATAATTGGTGCTAAGTATTATAGAGCTGCTGCTAGTGATGGATTCATGAGCCAAAAATATCTCAAATCTCCAAGAGACTCAGAAGGTCATGGGACTCACACAGCATCAACAGCAGCTGGGAACCCAGTTAGCATGGCAAACATGTTAGGCCTTGGACACGGAACAGCGAGAGGTGGTGCCACGTCAGCACGCATTGCCGTCTATAAAGCGTGTTGGGCTGATGGATGTGATGAAGCAGACATTCTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATATTGTCAGTGTCACTTGGAGGATTCAGTGATCTAAACTATTTTAGAGATGTAATGTCCATTGGAGCATTTCATGCCATGAAAAATGGAATAGTGACAGTATTTGCAGCAGGGAACGAAGGTCCAGCTCCTGCAACCGTAGAGAATTTATCACCTTGGTCAATTTCAGTGGCTGCTAGCACCTTAGACAGGAAGTTTGTTACCAAGGTTGAATTAGGAGACAACAGAACTTATGAGGGAATCTCGATAAATACATTTGACCTTAAGGGAGAATTATATCCTATAATCTTTGGTGGAGATGCACCAAATACTAAAGCAGGCATGGATGGATCTATATCCAGGGCTTGCGTACCCAATTCGTTGGATCCAAATTTGGTGAAGGGTAAAATTGTTCTCTGCGAGGGCAGAAGCAAAGGGACTCCAACTGCAACCATATTTAAGAGCCATGAGTTAAAAGATACTTTGGCTCCGCAGGTAGCCTCTTTCTCATCAAGGGGTCCAAATTTAGTTACACCTGAAATTCTCAAGCCGGATTTGACTGCTCCCGGAGTTGACATTATAGCTAGTTGGTCTCCAATTTCCCCTGCTTCTGAAATTGATGGCGACAAAAGAAAACTACAGTTCAATATTATCTCGGGAACATCAATGTCTTGCCCACACGTGTCAGGTGCAGCAGGGTATGTCAAATCATTTCATCCTACTTGGTCTCCTGCTGCTATCCGTTCAGCTCTAATGACAACAGGTAACAGAATTGAGTCTAAACAGATGAGTCCCATGAGTAACCGTGATGCTGAATTCGCATACGGAGCAGGCCAAATTGATCCTTCCAAGGCTGTGAAACCCGGTTTGGTGTATGATGCTGGCGAAAGTGATTACGTGAGATTTTTATGTGGACAAGGTTATAGTTCAAAGATGTTAAAACTCATCACAGGGGATAACAGCAGTTGTTCTGAGACAACTTATGGCACGGCAAGGGATCTAAACTACCCTTCCTTTGCCCTTAAAGCCACACACTCCATACCCAATGTGAGTGGCCGTTTTTACAGGACTGTTACAAATGTTGGGTCACCAACGTCCACGTATAAAGCTACCGTGACTGCTCCTCGAGGACTAAAGATCAAAGCGATCCCGAGTGTTTTGTCATTCACTTCTCTCGGCCAAAAGCAAACGTTTGTGCTTACTATCGATGGAGCAATAGACGCAGCTACTGTGTCAGGTTCTTTGGTTTGGGATGATGGTGAATTCCGAGTGAGGAGTCCCATTATTGTGTTTGATGCACCAATACTGTAA 2097 0.4301 MANRSSSLLLLLLLSFTSLVLKCHSTSPDDLKNYIVYTGNNMKDEASLMSLYKSMLQEVADSNAAPKSVLHHYQRSFSGFVVKLTEKEADRIAGLDGVVSVFPNRKKQLYTTKSWDFIGFPQHVERKNAESDIVIGLIDSGIWPESESFDDKGFGPPPSKWKGTCQTSNFTCNNKIIGAKYYRAAASDGFMSQKYLKSPRDSEGHGTHTASTAAGNPVSMANMLGLGHGTARGGATSARIAVYKACWADGCDEADILAAFDDAIADGVDILSVSLGGFSDLNYFRDVMSIGAFHAMKNGIVTVFAAGNEGPAPATVENLSPWSISVAASTLDRKFVTKVELGDNRTYEGISINTFDLKGELYPIIFGGDAPNTKAGMDGSISRACVPNSLDPNLVKGKIVLCEGRSKGTPTATIFKSHELKDTLAPQVASFSSRGPNLVTPEILKPDLTAPGVDIIASWSPISPASEIDGDKRKLQFNIISGTSMSCPHVSGAAGYVKSFHPTWSPAAIRSALMTTGNRIESKQMSPMSNRDAEFAYGAGQIDPSKAVKPGLVYDAGESDYVRFLCGQGYSSKMLKLITGDNSSCSETTYGTARDLNYPSFALKATHSIPNVSGRFYRTVTNVGSPTSTYKATVTAPRGLKIKAIPSVLSFTSLGQKQTFVLTIDGAIDAATVSGSLVWDDGEFRVRSPIIVFDAPIL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2971 698 CDD Peptidases_S8_3 107 516 IPR034197 -
Ssu6g2971 698 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Ssu6g2971 698 SUPERFAMILY Subtilisin-like 109 552 IPR036852 GO:0004252|GO:0006508
Ssu6g2971 698 CDD PA_subtilisin_like 339 414 - -
Ssu6g2971 698 PANTHER PUTATIVE-RELATED 22 409 - -
Ssu6g2971 698 PANTHER PUTATIVE-RELATED 406 693 - -
Ssu6g2971 698 ProSiteProfiles Serine proteases, subtilase domain profile. 114 548 - -
Ssu6g2971 698 Pfam Peptidase inhibitor I9 34 108 IPR010259 -
Ssu6g2971 698 Pfam Fibronectin type-III domain 595 692 IPR041469 -
Ssu6g2971 698 Gene3D Peptidase S8/S53 domain 132 331 IPR036852 GO:0004252|GO:0006508
Ssu6g2971 698 Gene3D Peptidase S8/S53 domain 422 561 IPR036852 GO:0004252|GO:0006508
Ssu6g2971 698 Gene3D - 332 405 - -
Ssu6g2971 698 Gene3D - 407 421 - -
Ssu6g2971 698 Pfam Subtilase family 131 522 IPR000209 GO:0006508|GO:0008236
Ssu6g2971 698 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 409 IPR045051 -
Ssu6g2971 698 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 406 693 IPR045051 -
Ssu6g2971 698 ProSitePatterns Serine proteases, subtilase family, serine active site. 482 492 IPR023828 -
Ssu6g2971 698 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Ssu6g2971 698 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Ssu6g2971 698 PRINTS Subtilisin serine protease family (S8) signature 481 497 IPR015500 -
Ssu6g2971 698 Gene3D - 565 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2971 Ssu-Chr6 68136218 68139697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2971 30 693 Subtilisin-like Serine Gene Family AT5G59100 45.568 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2971 - - gmx:100784447 1123.23