Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2903 ATGGCCACAAAAGCTGAAGGCATCCAAGAAGAAGAAATGTCGAGTATGGAAGAGGGTGTTTCCCCTAGCCCTCCCGGAACCTGTGACATATTGCATAACTGTTGTTCATCAAACTATGTTGTAACCCTGGCACAGAAGGTGATCGCAGAAGTCATTGGCACATATTTTGTGGTATTTGCCGGTTGTGGCTCTGTGGCAGTGAATAAGATCTATGGCTCAGTCACATTTCCAGGTGTTTGTGTCACATGGGGGCTGATTGTAATGGTCATGATTTACTCTGTTGGCCATATCTCTGGAGCTCACTTCAATCCTGCGGTCACCGTCACTTTGGCCATCTTTCGCCGGTTCTCATATAAAGAGGTGCCACTGTACATTTTTGCTCAGTTGCTGGGGTCGATACTTGCTAGTGGCACATTAGCCCTAATGTTGGATGTAACGCCTAAAGCTTACTTTGGAACGGTACCAGTTGGATCCAATGGCCAGTCTTTAGTTGCTGAAATCATCATCACCTTTCTCTTGATGTTTGTTATATCTGCCGTTGCTACTGATGACAGAGCGGTTTGCACTCGTTCATACAATCTACATATATGTGgctttaaaaaatag 606 0.4439 MATKAEGIQEEEMSSMEEGVSPSPPGTCDILHNCCSSNYVVTLAQKVIAEVIGTYFVVFAGCGSVAVNKIYGSVTFPGVCVTWGLIVMVMIYSVGHISGAHFNPAVTVTLAIFRRFSYKEVPLYIFAQLLGSILASGTLALMLDVTPKAYFGTVPVGSNGQSLVAEIIITFLLMFVISAVATDDRAVCTRSYNLHICGFKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2903 201 MobiDBLite consensus disorder prediction 1 24 - -
Ssu6g2903 201 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Ssu6g2903 201 Gene3D Glycerol uptake facilitator protein. 31 199 IPR023271 -
Ssu6g2903 201 PANTHER AQUAPORIN NIP4-1-RELATED 33 188 - -
Ssu6g2903 201 SUPERFAMILY Aquaporin-like 42 196 IPR023271 -
Ssu6g2903 201 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu6g2903 201 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu6g2903 201 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu6g2903 201 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu6g2903 201 PANTHER AQUAPORIN NIP2-1 33 188 IPR034294 -
Ssu6g2903 201 Pfam Major intrinsic protein 41 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2903 Ssu-Chr6 67119657 67121408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2903 1 186 Major Intrinsic Protein MIP AT5G37820 64.171 1.35e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2903 K09874 - gmx:100803763 318.931