Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2835 ATGGAGCGTGCTGGTGTTGCAGCATTTTGGGGGAAAAGGTCATTGCGTCGAAATCGAAGGCAAGACAGTTCCGTTTCGGGTACAAAAAAAcaggaacaaaaacaaaaacaaattcacCAATTGAATCAAACACGAAGCCTCACCTCTCTGGCTCCCTCGCCAATGTCGCTTCTTCTCTTCACCCTTGTACCCTCAACgctcttcattttttgtttcttcaacgCCGTAACCGCCGCCACCGAGTTCGACTTCGGAACGTTAACCTTAGGCAGCCTCAAGCTGCTCGGCGACGCGCACTTGAACAACGGCACCGTCAGTCTCACGCGCGACCTCGCCGTCCCCATCTCCAGCGCCGGCAGGGCTCTCTACTCCCGTCCGGTCAGATTCCGGCAACCGGCAAACCCTTTTCCGGCGAGCTTCACCACCTTCTTTTCCTTCTCCGTCACCAACCTCAACCCTTCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTCTCGCCGGACGACGAGACCCTCGGCGACTCCGGCGGCTTCCTCGGGCTTAGCTCCGCCGCCGACgccggcggcggcggcggaggaTTCATCGCCGTGGAGTTTGATACGCTCATGGACGTGGAATTTAAGGACATTAACGGAAACCACGTTGGGGTGGACCTAAACAGCGTCGTTTCGAGCGAGGTTGGAGATTTGGCGAACATTGGGATCGATCTGAAGAGTGGCGACTTAATTAACGCGTGGATCGAGTTCGATGGGTCGAGCAAAGGGTTGAGCGTGTGGGTTTCGTACTCCAATCTCAAACCGAAAGATCCCGTTTTATCGATGAATCTCGACGTGGATAAgtatttgaatgattttatgTATGTGGGGTTCTCCGGCTCCACGCAAGGTAGCACGGAGATTCACAGAATAGAGTGGTGGAGTTTCGGTTCGTCTTTTGAGTctgcggcggcggcggcggcggcgccGCCACCGCCGGCTGTGAGTTTGATGAACCCGACGGCGAATTCGGTGAAGTCGGCGCCTCCTTCTTTGGCTCCTTCTAACAGCGAAGAGAAAGAGAGCAAAAGCAAATCGTCCTGCCACAGCGGGTTGTGTAAGCAAAATTTGGGTGCAGTTGCCGGGGTTGTTACTGCTGGGGCATTTGTGTTGGCTCTTTTTGCTGGTGCGTTGATTTGGTTTTACTCCAAGAAGGTTAAGCGTGTGAACAAGTTTGATTCGCTCGGATCGGAGATCATCAAAATGCCGAAGCAGTTTAGCTACAAGGAGCTGAAGTCTGCTACCAAGTGTTTCAATGCGAATAGGATCATAGGTCATGGCGCGTTTGGGACTGTTTATAAGGGGGTTTTGCCTGAGAGTGGGGACATTGTTGCGGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAACGAGTTTTTGTCTGAGTTGTCCATAATTGGGAGCCTGCGGCACCGGAATCTTCTTCGGCTTCAAGGGTGGTGCCATGAGAAAGGGGAGATTTTGCTGGTGTATGACTTGATGCCTAATGGGAGTTTGGATAAGGCTTTGTTTGAGGCTAGGACGCCGCTTCCCTGGGCTCACAGACGCAAGATTTTGCTGGGCGTGGCTTCGGCGTTGGCCTACTTGCATCAGGAGTGTGAGAATCAGGTGATTCATAGGGACATTAAGACTAGTAACATAATGTTGGATGAAGGGTTCAACGCAAGGTTGGGAGATTTTGGCTTGGCGAGGCAAACTGAGCATGATAAGTCGCCGGATGCCACGGTGGCTGCGGGGACAATGGGGTACTTGGCACCGGAGTATCTCCTCACGGGGAAGGCGACGGAGAAAACTGATGTGTTTAGTTATGGTGCAGTGGTTCTTGAGGTGGCCAGTGGGAGAAGACCGATAGAGAAGGATGCCAATGGTGGTAAACCTGGGATTAGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGGGAAGGCAGTTTGCTAATGGCGGCTGATCCGAGGCTTGAGGGCGAGTTTGATGAGGGGGAGATGAGGAGGGTGCTCTTGGTTGGGCTAGCTTGCTCTCACCCTGACCCATTGGCTAGACCTACCATGAGGGGTGTGGTTCAGATGCTGGTGGGTGAGGCTGAAGTGCCCATTGTACCAAGAACCAAGCCGACGACGGGTTTTAGTACTTCCCACTCCCACTTGTTGCTGAGCTTGCAAGACAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACCACCACATCAGAGAACAGCTTCAATCTTGGAGATATAGTCTGA 2277 0.5024 MERAGVAAFWGKRSLRRNRRQDSSVSGTKKQEQKQKQIHQLNQTRSLTSLAPSPMSLLLFTLVPSTLFIFCFFNAVTAATEFDFGTLTLGSLKLLGDAHLNNGTVSLTRDLAVPISSAGRALYSRPVRFRQPANPFPASFTTFFSFSVTNLNPSSIGGGLAFVLSPDDETLGDSGGFLGLSSAADAGGGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLANIGIDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLSMNLDVDKYLNDFMYVGFSGSTQGSTEIHRIEWWSFGSSFESAAAAAAAPPPPAVSLMNPTANSVKSAPPSLAPSNSEEKESKSKSSCHSGLCKQNLGAVAGVVTAGAFVLALFAGALIWFYSKKVKRVNKFDSLGSEIIKMPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGVLPESGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLLRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWAHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGGKPGISSNLVEWVWSLHREGSLLMAADPRLEGEFDEGEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPTTGFSTSHSHLLLSLQDSVSDCDGIITISTTTSENSFNLGDIV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2835 758 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 315 IPR013320 -
Ssu6g2835 758 MobiDBLite consensus disorder prediction 329 356 - -
Ssu6g2835 758 MobiDBLite consensus disorder prediction 16 43 - -
Ssu6g2835 758 CDD STKc_IRAK 435 701 - -
Ssu6g2835 758 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Ssu6g2835 758 CDD lectin_legume_LecRK_Arcelin_ConA 80 311 IPR001220 GO:0030246
Ssu6g2835 758 Gene3D - 78 320 - -
Ssu6g2835 758 SUPERFAMILY Protein kinase-like (PK-like) 411 724 IPR011009 -
Ssu6g2835 758 MobiDBLite consensus disorder prediction 16 36 - -
Ssu6g2835 758 SMART serkin_6 429 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2835 758 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 74 750 - -
Ssu6g2835 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Ssu6g2835 758 PANTHER - 74 750 - -
Ssu6g2835 758 Gene3D Phosphorylase Kinase; domain 1 392 504 - -
Ssu6g2835 758 ProSiteProfiles Protein kinase domain profile. 429 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2835 758 Pfam Legume lectin domain 81 316 IPR001220 GO:0030246
Ssu6g2835 758 Pfam Protein kinase domain 430 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2835 758 Gene3D Transferase(Phosphotransferase) domain 1 505 707 - -
Ssu6g2835 758 MobiDBLite consensus disorder prediction 329 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2835 Ssu-Chr6 65726438 65729424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2835 55 740 Receptor kinase-like Gene Family AT3G53380 69.871 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu6g2835 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2835 - - gmx:100793157 1182.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1412 9 49017373 49019400 Ssu6g2835 6 65726438 65729424 PCT