Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2833 ATGACGCCTAAACCTTTCAACTTTCCCGCCAAACGCACAACCGCACTTTTCCTCCTaaccgccgccgccgccgccgccgcacAAAGTACCACCTCCGCCTTGCCATCTCCTCTCCCGGCACTCTCCGCCGAAAAAATTGGAGCCGAAATCCACGGCCTCATCCGCACCGCTCGTGCCGTCTCCACGGTCGCTTCCACTGTCGTTGACTACGAATTCTCGTTGCGCGGCCTTCAAAAGGACTCCGACCAGTACCGTCAAGCAATTTCTCAGGTTCATCTACGCTCCGCCAAGAGGTTTCTCAAGATATGCGAAGCCAACAAAGGGTTTTACGTGAAGGCTGGACAGTTCGTTGCTGCGCAGAAAGTGCTTCCGAGAGAGTACTCGTCCACTCTGTCTTCATTACAGGACCAGGTTGCTCCTCTCCCTTTTAAAGTTATTAGGGAAGTGTTAAAGGATAATCTCGGACCTGATTTCTCTGAGATGTTTTTGTCAATTGATGAACAACCTATAGCTGCTGCATCTATTGCTCAAGTTCACCGTGCAGTGCTGAAAAGTGGTCATGAAGTAGCCATCAAGGTACAATATCCTTGGATAGAGCAGCAGATGAATTTTGatacaagaacaatatatttcCTGTCAAAAACTATTGCATGGTTATACCCTCAATACAGGCTTGGGTGGCTACCATTAGTGTTTGCCAAGTCTGTGTCTTCAGAACTTGATTTTGTTCGGGAGGCAAGGAATTCTGAGATAGCAGCCAAAAATTTCAGAAATAACAAAATGGTCAGAATTCCTCATGTATTCTGGGACTTGACAACAAGGGTAGTCCTAACCATGCAGTTTTATACAGGACACAAGATTGATGACTTGGACTTTCTGAATCAGATTGGGGTTGATCCAGAAAAGGTAGCAAAATCACTGACTGAGCTGTTTGCTGAAATGATATTTGTACATGGTTACATACATGGTGATCCACACCCTGGTAATATATTAGTTTCTCCTGAAGGTTGCAATGGTTTTGGTTTCTCTTTGGTTCTTCTAGATCATGCAGTCTACACGGTATTGGATGAAGATTTTAGAAAAGATTTCTGTCAGTTATGGGAAGCTTTGATTCTTAAGGATGCAATAAAAACAATGTGGCTTGGTGAGCGATTTGGTGCTGGGAAGTATTCCAGATACTTACCCATCGTTTTCACTGGAACAACCATTGAGAGCAAATATGCTGTTGGAATATCAATCGAGGAAAAAGAGACCTTGAAACACGACTTGAAATCTCTGTTGTTTGAGGACGTATCTTCATTCATGGAGTCCCTGCCCCCAGATTTTATTGCTATAATGCGTGTAGATGCACTGCTAAGGTCTATAATTAGAAAGATGGATGCCTCACGGGTCATGAGGTTGCTAACTTACACCAAATATGCAGTGTATGGTCGTCTCTGTCCAAAGTCGGATGGTGAAGGTGAATCATCTAAAATACTCAGAACAAACTTCTGTTTTGCCGTGAAAGCTGGTTTTTTCAGTTTCATATCAACGTTAAAATATCTTCGCATCCTACTAACGGTCTTTATAGGGTCCATTGACGTTATCCCTTGGCGGCAGAAGTTGAAAAGTGTACAAAATTACTTGTATAGCAAGATCAATTGTGACTCTTTGGGCCTCCTGGTGCATTCcgttttccttcttttatgtaTACGTCCTAGTGCATTGTTTTAA 1713 0.4168 MTPKPFNFPAKRTTALFLLTAAAAAAAQSTTSALPSPLPALSAEKIGAEIHGLIRTARAVSTVASTVVDYEFSLRGLQKDSDQYRQAISQVHLRSAKRFLKICEANKGFYVKAGQFVAAQKVLPREYSSTLSSLQDQVAPLPFKVIREVLKDNLGPDFSEMFLSIDEQPIAAASIAQVHRAVLKSGHEVAIKVQYPWIEQQMNFDTRTIYFLSKTIAWLYPQYRLGWLPLVFAKSVSSELDFVREARNSEIAAKNFRNNKMVRIPHVFWDLTTRVVLTMQFYTGHKIDDLDFLNQIGVDPEKVAKSLTELFAEMIFVHGYIHGDPHPGNILVSPEGCNGFGFSLVLLDHAVYTVLDEDFRKDFCQLWEALILKDAIKTMWLGERFGAGKYSRYLPIVFTGTTIESKYAVGISIEEKETLKHDLKSLLFEDVSSFMESLPPDFIAIMRVDALLRSIIRKMDASRVMRLLTYTKYAVYGRLCPKSDGEGESSKILRTNFCFAVKAGFFSFISTLKYLRILLTVFIGSIDVIPWRQKLKSVQNYLYSKINCDSLGLLVHSVFLLLCIRPSALF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2833 570 CDD ADCK1-like 133 375 IPR045307 -
Ssu6g2833 570 SUPERFAMILY Protein kinase-like (PK-like) 135 372 IPR011009 -
Ssu6g2833 570 PANTHER ABC1 FAMILY PROTEIN 35 516 - -
Ssu6g2833 570 Pfam ABC1 atypical kinase-like domain 133 375 IPR004147 -
Ssu6g2833 570 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 35 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2833 Ssu-Chr6 65689499 65701195 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2833 K08869 - gmx:100786615 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2833 6 65689499 65701195 Ssu6g2833 6 65689499 65701195 ECH
Ssu4g0467 4 7479809 7483617 Ssu6g2833 6 65689499 65701195 PCT