Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2793 ATGGGGAAACAGATTGTGCCGGTGAAGTCGGTGATCTACGCGCTCTCCCCTTTCCAGCAGAAGATAATGACGGGTCTCTGGAAAGATTTGCCGACGAAGATTCACCACAAGGTCTCCGAGAATTGGATCAGCGCCACTCTCTTGCTCGGTCCCCTCGTTGGCACCTACACGTATGTTCAGAACTACCAGGAAAAGGAGAAGTTGACTCACAGtttggataaacttttcaaaGCTTGTGTGGATAGCACCGAGAAGCAAGATGGGGGAGGTTCAGGGCCTCTGCTGGGAAACCAGAACCATGGTGAAAACTCTTTTGACTACCTTAGAACAACTTTCTTTTCCAAGCTTCCTGATAAGGTCCGTTCTAGCCTCGACTCTGAGTCTCCCTTTGAGTTTGACCATCATTTCTCCACCAGCACCAACATGTTGGTATATATGGTGTTCTGTtctgttttgaattttgaagactGTTCAATTTACTTGGTTTCACCTTTTGCTCTCAAGGATTTGGGAATGTCAAggatttcaaaaatttga 537 0.4302 MGKQIVPVKSVIYALSPFQQKIMTGLWKDLPTKIHHKVSENWISATLLLGPLVGTYTYVQNYQEKEKLTHSLDKLFKACVDSTEKQDGGGSGPLLGNQNHGENSFDYLRTTFFSKLPDKVRSSLDSESPFEFDHHFSTSTNMLVYMVFCSVLNFEDCSIYLVSPFALKDLGMSRISKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2793 178 Gene3D - 4 73 IPR036642 GO:0005750|GO:0006122
Ssu6g2793 178 Coils Coil 178 178 - -
Ssu6g2793 178 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 79 IPR020101 GO:0005750|GO:0070469
Ssu6g2793 178 PANTHER CYTOCHROME B-C1 COMPLEX, SUBUNIT 8 1 79 - -
Ssu6g2793 178 Pfam Cytochrome b-c1 complex subunit 8 1 70 IPR020101 GO:0005750|GO:0070469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2793 Ssu-Chr6 64846575 64854984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2793 1 72 Chloroplast and Mitochondria Gene Families AT3G10860 75.000 2.01e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2793 - - gmx:100500582 140.584