Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2783 ATGGCGGATGACAATGAGATGAAGGAGGAGGTTGCAGAAATTGCACCTTTTGATCCtaccaagaagaagaagaagaagaaaattacaaTTGTAGATCCTGCTGATGAGCCGGTGGACAAATTGGCTGAGAAGACAGAAAACCTCTCAGTTTCTGAAGGGGTTGAGACTGCATTTACTggtttgaaaaagaagaagaagaagcctGTTGAAATCAGTAACTTGACTGATGATAGTGGAGATGCAATTGAAGATTTGGATGATCATGCTGAAGATGATGAAGGAGAAATGGTTGCTCCTCAGGCTCGTTATCCTTGGGAAGGGAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGATCGGCGAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGATCTATGCAAAAcGATGCATAGGCAGCCAGACCATGTCATGACTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCCCTTGATGGACAACAGAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTCATTTGCCTTGGATGCAAGAGTCCAGATACTATACTTACGAAGGAGAACCGTCTTTTCTTTCTTCGGTGTGAGAAGTGTGGATCAGGACGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACGGGACATGATTTGGTctacttttaa 816 0.4056 MADDNEMKEEVAEIAPFDPTKKKKKKKITIVDPADEPVDKLAEKTENLSVSEGVETAFTGLKKKKKKPVEISNLTDDSGDAIEDLDDHAEDDEGEMVAPQARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGHDLVYF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2783 271 Pfam Domain found in IF2B/IF5 135 244 IPR002735 GO:0003743|GO:0006413
Ssu6g2783 271 Gene3D - 109 251 - -
Ssu6g2783 271 PANTHER BNAA02G05130D PROTEIN 1 264 - -
Ssu6g2783 271 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 264 IPR045196 GO:0003743|GO:0006413
Ssu6g2783 271 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 215 250 IPR016190 GO:0003743|GO:0006413
Ssu6g2783 271 SMART eIF2Bneu4 136 245 IPR002735 GO:0003743|GO:0006413
Ssu6g2783 271 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 111 218 IPR016189 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2783 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 76.103 2.74e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2783 K03238 - gmx:100783618 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2783 6 64533551 64537085 Ssu6g2783 6 64533551 64537085 ECH