Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2776 ATGGCAAGTTTGCTTGTTCCGAAGATTGATCCGCTCAGTCTCTCCTTGAAAAAGATCAAAGAAGACATCACAAAGGAGAAAGTAAAGGATAGGAAAGGATCGAGGGTCACCGTGAAGCTCATCTTGCAGAGTTGTCAAGTGAAGGTCATGGTGGTCCCCTCTGTAGCGACGCTCGTCATCGAGGCTCTTAAAGAACCCAAACGTTGTTGCAAGAAGATGAAGAGTGTAGAATCTGCCTag 240 0.4583 MASLLVPKIDPLSLSLKKIKEDITKEKVKDRKGSRVTVKLILQSCQVKVMVVPSVATLVIEALKEPKRCCKKMKSVESA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2776 79 Gene3D - 1 63 IPR036796 -
Ssu6g2776 79 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 3 64 IPR036796 -
Ssu6g2776 79 PANTHER 60S RIBOSOMAL PROTEIN L12-3-LIKE 2 77 - -
Ssu6g2776 79 PANTHER 60S RIBOSOMAL PROTEIN L12 2 77 IPR000911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2776 Ssu-Chr6 64391949 64392188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2776 2 76 Cytoplasmic Ribosomal Protein Gene Family AT2G37190 62.667 3.22e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2776 K02870 - pda:103708408 88.9669