Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2771 ATGAAGAAGCTCAAAGAGTTCAAAACCGTTCATGGGATGGAGGCATGTGCCATAGTGCGCAGTGTTGATGCTGGTGAGCCAGAGATTTGGGCATCCAGTAAGGGTCTCCGAAAGGCGCTAATGAAGTCGGCGCAAGAGCAGCAGAGAAGGAGGATGGAGAGCCAAGAAGATCAGGGGAACCTGGACAAAACGATCAAGAAGGCCAAGAAGAAGCTGGGGAAGCAGAAGGAGTTTCGTGTACATGATGAGACATTGGATTTTCCAGATCCACAAGATTTAACAAAGAATGGGCTGAAAGGGGTGTTGGAATTGATTGATGTGAATATGAAAGAAATTATGCGGAAGTTGGAGGAATTAAAGAAGAATGAACCCACCGAGGTCCAAGCCACAGTGGCTGCACCACCTCCAGTTAAGATTGGTGATGAAGCAGACAAGCACAAAGGAAAGAAACACAAAGGAAAGAAACCTCTGATTGTCAAAGGTGGAGAGGGTTTGGAGATGATTGTGGAAGCCATGGATCAGCTACAGatcaaataa 537 0.46 MKKLKEFKTVHGMEACAIVRSVDAGEPEIWASSKGLRKALMKSAQEQQRRRMESQEDQGNLDKTIKKAKKKLGKQKEFRVHDETLDFPDPQDLTKNGLKGVLELIDVNMKEIMRKLEELKKNEPTEVQATVAAPPPVKIGDEADKHKGKKHKGKKPLIVKGGEGLEMIVEAMDQLQIK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2771 178 MobiDBLite consensus disorder prediction 123 157 - -
Ssu6g2771 178 MobiDBLite consensus disorder prediction 41 63 - -
Ssu6g2771 178 MobiDBLite consensus disorder prediction 43 63 - -
Ssu6g2771 178 Coils Coil 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2771 Ssu-Chr6 64360426 64360962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2771 1 140 Type I MADS-box Gene Family AT5G27960 26.282 9.71e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2771 - K17552 egr:104444521 63.1586