Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2768 ATGAGTTTTGCACACTTGCAGGTACTGAGAAACTGCTATTGTTTATTAttgtcaattaaaattttctccttTGTGCTAGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAAGAAGAATATAATGAACTAGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATACAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTCCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTAGTACCTGCAGAAAAGAGACCGTCGGCAAAAGAATTGTTGCTTGACCCTTTTCTTGTGTCTGATGATTCGTCCTCAGCAATGAAGTTTGCAATTCAGAAGCCATTTTTGAATGCCAGTGAGATGGAGAAACTGCAATTAAGTGATGATCTTCCTAGGACTGGAATGAAAGTAATAGGGAAGCTGAATCCTGAAGATGATACCATCTTTCTCAAAGTGCAAATTTCAGATAAGGATGGTTCTGTTAGGAATGTGTTTTTTCCCTTTGACATTTTCAATGACACCCCTATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTGCTGATTGGGAGCCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCACAGAAGGCAAAGTAGCTGTTCAGATGCCTTCCACACATTCAATTATCTAGATGATGATGGTGACGATGATGGACCTCATCATCATTTCCACTCGTTCTCTTCTAGTTCATCATTCCGAGAATCAATGTCAGATTTAGTCAGTAAAGCTAAGGAAATATCAAGTGGATATTATTGGCTCCATGATGATTTGCATGATGATACCAGTTCCCGATGCTCTTCACAAGGGACATATTCCAACTTGAATTACTATTCTGTGGATGATCAAGAGTACAACGTGCCTTCTTTGAGAAAAGATAAACCTCCCACCATGAAGAGTCACAAGGGCAAAAGGTTTTCCCCTGGCGAAGACTTATGCAATTTCAACCAGTCTAAAGTCATGGCAGGATCACATACCCCTTTTAcgagtaaaaataagatgatgATAAACAATCCCAGATTAACAAGGAACAGGTCATTGATTGATTTACGGAGCCAACTATTACACCGATCACTGGTTGAAGAGGTAAACAAAAGACGGTTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACTACAAAAAGGTCACAGCCTGTACGTGTTGCTCCAAATGAGAACTCTCCAAGGAGTGTCAAGggagaaaaaattaagagataa 1353 0.3836 MSFAHLQVLRNCYCLLLSIKIFSFVLGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLVPAEKRPSAKELLLDPFLVSDDSSSAMKFAIQKPFLNASEMEKLQLSDDLPRTGMKVIGKLNPEDDTIFLKVQISDKDGSVRNVFFPFDIFNDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPHRRQSSCSDAFHTFNYLDDDGDDDGPHHHFHSFSSSSSFRESMSDLVSKAKEISSGYYWLHDDLHDDTSSRCSSQGTYSNLNYYSVDDQEYNVPSLRKDKPPTMKSHKGKRFSPGEDLCNFNQSKVMAGSHTPFTSKNKMMINNPRLTRNRSLIDLRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSQPVRVAPNENSPRSVKGEKIKR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2768 450 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 430 - -
Ssu6g2768 450 Pfam Protein kinase domain 25 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2768 450 Gene3D - 164 237 - -
Ssu6g2768 450 MobiDBLite consensus disorder prediction 428 450 - -
Ssu6g2768 450 Gene3D Transferase(Phosphotransferase) domain 1 12 128 - -
Ssu6g2768 450 SUPERFAMILY Protein kinase-like (PK-like) 22 147 IPR011009 -
Ssu6g2768 450 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2768 450 PANTHER WNK KINASE 25 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2768 Ssu-Chr6 64249412 64253289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2768 7 426 MAP Kinase Kinase Kinase AT5G58350 52.225 6.89e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ssu6g2768 Pkinase 3.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2768 K08867 - gmx:100272207 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1295 9 46833834 46838095 Ssu6g2768 6 64249412 64253289 PCT