Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2762 ATGCCGGAAATCGAGCGCGCGGCGGAGAACCCCGCCCTGTTCGGGAAATACGAGGTGGGAAGACTCCTGGGATGCGGCGCGTTCGCGAAGGTGTACCACGCGCGGAACGTGGAGACGGGCCAGAGCGTGGCCGTGAAGGTCGTGAGCAAGAAGAAACTAAACTCGACGGGGTTAGCCTCCAACGTGAAACGCGAGATCTCCATCATGAGCCGCCTCCACCACCCCAACATCGTGAAGCTCCACGAGGTCCTGGCGACCAAGACCAAGATCTACTTCGTCTTGGAATTCGCGAAAGGCGGCGAGCTCTTCGCGAGAATCGCCAAGGGCCGCTTCGGCGAAGACCACGCGCGGCGCTACTTTCAGCAGCTGATCTCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACCTGAAGCCGGAGAATCTCCTCCTCGACGAGAACGGGAACCTCAAGGTCTCCGACTTCGGACTCAGCGCGGTCAAGGACCAGGTCGGGGTGGACGGCTTGCTCCACACGCTTTGTGGGACCCCTGCTTATGTGGCACCCGAGATTCTCGCGAAGAAGGGCTACGATGGGGCTAAGGTTGACGTTTGGTCGTGTGGGGTTGTTCTCTTCGTTCTCGTCGCTGGGTATCTTCCGTTCAATGACCCTAATTTGATGGTGATGTATAGGAAGATTTACAAAGGGGAGTTTCGGTGTCCGAGGTGGTTTTCGATGGAGTTGAGGAGATTTTTGACGAGGCTGTTGGATACGAATCCCGAGACGAGGATCACCGTTGATGAGATTTTGCGGGAACCGTGGTTTAAGAAGGGGTATAAGGAGGTGAAGTTCGGGGATTTGGGCTTGGAGTGGAAGAGCGAGGGTGAAGGGGTGAAGGATTTGAATGCGTTTGATATTATCTCGTTTTCCTCGGGGTTGAATCTCTCGGGGTTGTTTGATTCGTCGTTTGGGGTTGAAGAGGGGGAGAGGTTCTTGCTTAAGGAGTCGCCGGAGAAGGTGGTGGAGAACGTCGCGGCGGCGGCGGCCGGCGAGGGGGTGGTGGTGCGGACCAGGAAGGAGTGCGGGTTGGAGCTGGAGGGGTGTGGGGGTAATTTCGCGGCTTTGGTGGAGGTTTACCGGTTACCGGGGGAgctggtggtggtggaggtgaggAGGAGGGATGGGGATGGTGGGGTTTTTAGGGATGTGTGGAGGAATAAGCTGAGGCCGTATCTCTGTGCTGCGAGTAGCAGTACGACGTCGGATCGCGAGGGAACTGGGGCGCAGCCGGTTGCCGGTGAATGA 1293 0.5731 MPEIERAAENPALFGKYEVGRLLGCGAFAKVYHARNVETGQSVAVKVVSKKKLNSTGLASNVKREISIMSRLHHPNIVKLHEVLATKTKIYFVLEFAKGGELFARIAKGRFGEDHARRYFQQLISAVGYCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQVGVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLVAGYLPFNDPNLMVMYRKIYKGEFRCPRWFSMELRRFLTRLLDTNPETRITVDEILREPWFKKGYKEVKFGDLGLEWKSEGEGVKDLNAFDIISFSSGLNLSGLFDSSFGVEEGERFLLKESPEKVVENVAAAAAGEGVVVRTRKECGLELEGCGGNFAALVEVYRLPGELVVVEVRRRDGDGGVFRDVWRNKLRPYLCAASSSTTSDREGTGAQPVAGE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2762 430 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2762 430 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2762 430 Pfam NAF domain 296 352 IPR004041 GO:0007165
Ssu6g2762 430 ProSiteProfiles NAF domain profile. 292 316 IPR018451 GO:0007165
Ssu6g2762 430 CDD CIPK_C 298 409 - -
Ssu6g2762 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Ssu6g2762 430 Gene3D Transferase(Phosphotransferase) domain 1 8 293 - -
Ssu6g2762 430 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Ssu6g2762 430 PANTHER - 1 420 - -
Ssu6g2762 430 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2762 430 Gene3D Kinase associated domain 1, KA1 294 411 - -
Ssu6g2762 430 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Ssu6g2762 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2762 Ssu-Chr6 64151691 64152983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2762 1 417 CBL-interacting serine-threonine protein kinases AT2G30360 65.127 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ssu6g2762 Pkinase 9.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2762 - - gmx:100815088 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2762 6 64151691 64152983 Ssu6g2762 6 64151691 64152983 ECH
Ssu9g1291 9 46765104 46767143 Ssu6g2762 6 64151691 64152983 PCT