Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2756 ATGGCACTTTCTTCTTCTCGATCTTCAACAGCTACTTTTGCTTTAGCTTTGTTCATGCTTTTGCTTATAGGAAGTTCTTCGGCTCAACTCTCTGAAAACTTCTATGCTCAGAAATGTCCCAAGGTTTTTTATGCTGTAAAATCTGTTCTTCAATCTGCCGTGGCTAAAGAGCCTCGCATGGGAGCATCTCTGCTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGCGATGGATCGGTTTTACTTGATGGCGCTTCCTCCGAGAAGATTGCGCCTCCCAACAACAATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATCAAGTCTAAGGTGGAGGCAGTATGCCCCGGAGTGGTGTCGTGTGCTGATATTGTAGCCATTGCTGCTCGTGACTCTGTTGCAATTCTGGGAGGGCCATTTTGGAAGGTTAAACTTGGTAGAAGGGATTCCAAGACAGCCTTCTTCCGAATTGCAAACACTCAAGGTGTGCTCCCATCTCCCTTTGGTTCCCTCAGCAACCTTATCTCTAGCTTTCAAAAGCAAGGGCTCTCTCCCAAGGACATGGTTGCCTTATCTGGAGGACACACGATTGGGAAGGCAAGGTGTGTTAGTTATAGAAGTCGTATATACAATGACAAGAACATTGACAGTTTATTTGCTAAGGCAAGGCGGAAGAACTGTCCAACTAGTAGTGGGACACCAAAAGACAACAATGTAGCACCGCTAGACTTCAAAACTCCTAACCATTTTGACAACAGTTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAATGGAGGATCCACAGATTCACTTGTTAGAACTTACAGCAACAATCAGAAGGCCTTTGAGTCTGACTTTGTTACTGCCATGATTAAGATGGGAAACATTAAACCTTTAACTGGGTCAAATGGGCAGATAAGGAGAAACTGTAGGAGGTCCAATTAA 975 0.44 MALSSSRSSTATFALALFMLLLIGSSSAQLSENFYAQKCPKVFYAVKSVLQSAVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDGASSEKIAPPNNNSLRGFEVIDAIKSKVEAVCPGVVSCADIVAIAARDSVAILGGPFWKVKLGRRDSKTAFFRIANTQGVLPSPFGSLSNLISSFQKQGLSPKDMVALSGGHTIGKARCVSYRSRIYNDKNIDSLFAKARRKNCPTSSGTPKDNNVAPLDFKTPNHFDNSYYKNLINKKGLLHSDQELFNGGSTDSLVRTYSNNQKAFESDFVTAMIKMGNIKPLTGSNGQIRRNCRRSN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2756 324 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601|GO:0042744
Ssu6g2756 324 Gene3D - 33 324 - -
Ssu6g2756 324 PANTHER PEROXIDASE 3 323 - -
Ssu6g2756 324 Gene3D Peroxidase, domain 2 166 303 - -
Ssu6g2756 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Ssu6g2756 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 PANTHER PEROXIDASE 72-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2756 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2756 Ssu-Chr6 64032755 64036958 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2756 11 324 Peroxidase AT5G58400 62.776 1.85e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2756 K00430 - gmx:100812478 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2756 6 64032755 64036958 Ssu6g2756 6 64032755 64036958 ECH
Ssu6g2756 6 64032755 64036958 Ssu9g1284 9 46668726 46673904 ECH
Ssu4g2479 4 62279069 62282509 Ssu6g2756 6 64032755 64036958 ECH
Ssu9g1284 9 46668726 46673904 Ssu6g2756 6 64032755 64036958 PCT