Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2754 ATGGCTTCTCATATCCAATCATTCCTTGTGCTTGTGCTTGCTATGGTCACATTATTGGTCCCTACCAATGCACAGCTTTCTCCCCATTTCTATGATAAAGTTTGCCCTCAGGCATTGCCAGTCATAAGGTCAGTGGTTCAACAAGCAATTAGCCGTGAGCGACGCATCGGAGCATCTCTCCTGCGCTTGCATTTCCATGACTGCTTCGTAAATGGCTGTGATGGATCAGTTTTGCTGGATGACACCCGAAAATTCACTGGCGAGAAAACTGCCTTGCCAAATTTAAATTCAGCCAGAGGTTTTTCGGTGGTTGATGAAATCAAAGCAGCGGTGGACAAAGCCTGCAAACGCCCTGTCGTGTCATGTGCAGACATCTTAGCCATAGCAGCTCGTGATGCTATAGCCATAGTTACCATACAAACTCGCATGCATCAACTGTCACGCTTCTCAGCTAATGTTTTAATTGACTCATCTTTttgTGATGGCGACGATGGTAATGGAGGCGACAGTGGTAGTGGCAGCGATgacaacaatagtggtggtagtggtgacgatggtggtggtgatggtggtaaaGATAacgacaatagtggtggtggcaatggtaaTATGATGGTGGTAGCAACGACAATGAAGGTGGTGGCTGTGATGCCGGCAACTGTGGTGGTGGCACCAACGATAGTGGTGGCGGCAGTGGCGATAACAATGACAAGATAG 717 0.4226 MASHIQSFLVLVLAMVTLLVPTNAQLSPHFYDKVCPQALPVIRSVVQQAISRERRIGASLLRLHFHDCFVNGCDGSVLLDDTRKFTGEKTALPNLNSARGFSVVDEIKAAVDKACKRPVVSCADILAIAARDAIAIVTIQTRMHQLSRFSANVLIDSSFCDGDDGNGGDSGSGSDDNNSGGSGDDGGGDGGKDNDNSGGGNGNMMVVATTMKVVAVMPATVVVAPTIVVAAVAITMTR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2754 238 MobiDBLite consensus disorder prediction 165 201 - -
Ssu6g2754 238 PANTHER PEROXIDASE 72-RELATED 4 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 SUPERFAMILY Heme-dependent peroxidases 25 139 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PANTHER CATIONIC PEROXIDASE 4 145 - -
Ssu6g2754 238 Gene3D - 26 166 - -
Ssu6g2754 238 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu6g2754 238 Pfam Peroxidase 43 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2754 238 ProSiteProfiles Plant heme peroxidase family profile. 25 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2754 Ssu-Chr6 63987016 63996016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2754 3 137 Peroxidase AT5G58400 56.296 1.36e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2754 K00430 - gmx:100811396 219.935