Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2753 ATGGATTCTCATCTCCAATCTTTCCTTGTGGTTGTTATGGTCTCTTTGGCAACATTTATAGTCCCTACCCTTGCACAGCTCACCCCTGATTATTATGACAAAGTTTGCCCTCAGGCGTTGCCAATCATAAAGTCAGTTGTTAATCAGGCAATTATTCGTGAGAAACGCACAGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTGCTGCTAGATGACACACCTTTCTTCTTGGGCGAGAAGACTGCACTTCCAAACATTAATTCACTTAGAGGATTTGAGGTGGTTGATGAAATCAAAGCAGCAGTTGACCAAGCTTGCAAACGTCCTGTAGTATCATGTGCAGATATCTTGGCTATAGCAGCTCGAGACTCTGTAGCCATAGTGAGTGTCATCCAAATTAATCTTTCATCAATTCTCctgagaaattattgtatagtATGA 471 0.4098 MDSHLQSFLVVVMVSLATFIVPTLAQLTPDYYDKVCPQALPIIKSVVNQAIIREKRTGASLLRLHFHDCFVNGCDGSVLLDDTPFFLGEKTALPNINSLRGFEVVDEIKAAVDQACKRPVVSCADILAIAARDSVAIVSVIQINLSSILLRNYCIV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2753 156 PANTHER PEROXIDASE 72-RELATED 4 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 Pfam Peroxidase 44 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 ProSiteProfiles Plant heme peroxidase family profile. 26 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PANTHER CATIONIC PEROXIDASE 4 149 - -
Ssu6g2753 156 SUPERFAMILY Heme-dependent peroxidases 26 143 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Ssu6g2753 156 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2753 156 Gene3D - 27 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2753 Ssu-Chr6 63980202 63981846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2753 25 135 Peroxidase AT5G05340 63.063 7.70e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2753 K00430 - gmx:100810852 241.891