Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2741 ATGAACCCATCTGAGCAATTTGTGGAACATGGAATGTCTCAGCAGaatttaaagagaaaatctTGTGCAACTGTGCTCACTCTAGCGTACCAAAGTCTTGGAATAGTTTATGGTGACCTCAGCACTTCTCCTCTTTATGTTTACAAAACCACATTCTCAGGGAAATTGGGTCTCAAAGAAGGTGACGAGGAAATTTTTGGGGTGCTTTCATTTATCTTCTGGACATTTACCGTTGTTGCTCTCTTCAAATACGTTTTCATTGTGATGTCTGCTGATGACAATGGGGAAGGAGGTACCTTTGCATTATACTCACTTCTCTGCCGGCATGCAAGACTAAGCATTTTACCAAATCAGCAAGCCACAGATGAGAAGCTATCTGCTTATACCACACAAGATTCTGCAGACACATGGCTGTCTGCTCATTTGAAGTTGTTCTTCGAAAAGCACCCAAGGTTCCAGAAAGGACTGCTGATCTTTGTTCTGCTAGGAACCTGTATGACAATTGGTGATGGTGTGATTACTCCTGCAATATCAGTTTTTTCAGCAGTTTCAGGAGTTCAAGTTAAGATCAAAGAACTCCATGACAATTATGTTGTCATAATCTCGTGTGTCATTTTAGTGGCCCTTTTCTCCATTCAACATTATGGGACACAAAGAGTTGCTTTCATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGCATCAGTGGTATTGGTATATACAACATATTCCACTGGAACCGACAAATATACTGTGCACTTTCTCCACTTTATTTGTTGAGGTTCCTCAAAACCACTGGCATTGAAGGATGGGTGTCATTAGGTGGAGTGGTGCTTTCAATCACAGGGGTGGAGGCAATGTATGCTGACTTGGGTCATTTTTCTGCACTCTCAATAAAGATAGCTTTCACATGTCTAGTATATCCCTGCCTTATTTTGGCATATATGGGTGAGGCTGCATTTCTCTCTAAGCACCATTATGACATTCAAGGCAGTTTCTACAAAGCCATACCAGAAACTGTATTTTGGCCAGTTTTCATAGTGGCTACTTTTGCTGCCATTGTCGGAAGTCAAGCAGTGATTTCTGCTACCTTTTCCATCATAAGTCAATGCTGTGCGTTAAATTGTTTTCCTCCAGTTAAGATTGTTCATACTTCAAGAAGAATATACGGACAGATTTATGTCCCAGAAGTCAATTGGACATTAATGTGCCTTTGTTTAGCTGTCACGATTGGCCTAAGGGATACAAACATGATGGGTCATGCATACGGGCTGGCTATCACCACTGTTATGTTTGTGACAACATGCTTGATGACACTAGTAATGGTGATTGTCTGGAAGCAAGGAATAATAAAAGCCATTATATGTTTGGTATTGTTTGGATCAATTGAGCTGCTCTATATCTCAGCTTCTATCTGCAAAGTCCCTGAAGGAGGATGGATCCCACTTGTgctatcttttatctttatgaGTATAATGTTTACTTGGAACTATGGAACAATGAAGAAACATGAATTTGATGTGGAAAACAAGGTTTCAACGAGCAAGATCCTATCCTTGGGACCTTGTCTAGGCATGGTCCGCGTCCCTGGAATAGGAATCATTTCAGTAATCTGGCTTCAGGTGTCCCAGCTATTTTTGGCCATTTTGTTACAAACTTGCCAGCATTCCATCAGGTGTTAG 1683 0.4058 MNPSEQFVEHGMSQQNLKRKSCATVLTLAYQSLGIVYGDLSTSPLYVYKTTFSGKLGLKEGDEEIFGVLSFIFWTFTVVALFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQATDEKLSAYTTQDSADTWLSAHLKLFFEKHPRFQKGLLIFVLLGTCMTIGDGVITPAISVFSAVSGVQVKIKELHDNYVVIISCVILVALFSIQHYGTQRVAFMFAPVVAAWLLCISGIGIYNIFHWNRQIYCALSPLYLLRFLKTTGIEGWVSLGGVVLSITGVEAMYADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIQGSFYKAIPETVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPPVKIVHTSRRIYGQIYVPEVNWTLMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVMVIVWKQGIIKAIICLVLFGSIELLYISASICKVPEGGWIPLVLSFIFMSIMFTWNYGTMKKHEFDVENKVSTSKILSLGPCLGMVRVPGIGIISVIWLQVSQLFLAILLQTCQHSIRC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2741 560 Pfam K+ potassium transporter 30 538 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu6g2741 560 TIGRFAM kup: potassium uptake protein 28 535 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu6g2741 560 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 536 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu6g2741 560 PANTHER POTASSIUM TRANSPORTER 14 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2741 Ssu-Chr6 63487078 63491716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2741 8 535 Inorganic Solute Cotransporters AT1G70300 61.039 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2741 K03549 - gmx:100798458 1014.99