Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2726 ATGATGTTCCTGTTCTCGATGGGAGTCAAAATAGATATATCTATGGTAATGAGAACAGGGAAAAAGACTTGGGCCATTGGCGTGTGTTCTTGCATATTGCCACTCATATTTAGCATATTTTGTGCCTTGGTTCTACGGCAACTTTTATCCCCGGAAACAGACCTCTACAAGTCCCTACTTTATATTGCAGCTTTCTCATCAACAGGTTCCTTTCAAGTCACTGCCAGTCTTTTAGAAGATTTCAAGCTCCTCAATTCAGAGGTTGGTCGATTAGCAATCTCTTCTTCTATGGTAAATGGAACACTCTCCGCTCTGTGGCAGACCATTGTAGTCTCACGGATGCAAACAAGAGTCTTTAAACCGAAAGACAAGCCTTCCAAATGGAAGGGCATTTCTTTGGTTGTTATGGTTATTTTCATTGTATGTATTCTTCGACCTATCATGTTATGGATGATACGCAAGACACCCAAAGGGAAGCCCATCAAAGAGTCCTATATAGTTTCCATCTATGTTATGGTGTTGGTGTGTTCATTATTTGGCGAGTTCATTGGGGAGCACTTCATGATTGGGCCTATGATTTTGGGCCTAGCAGTGCCAGAAGGCCCACCGCTTGGATCAGCATTGGTAGAAAGGCTAGACACCATGATCTCAGGAGTGCTTATGCCGTTGTTCTACTTCTCTAGTAGTGCCAGATTCAAGCTCCATCTAGTTGATGGCTATAGTTTTGCAATTGTGCAGCCTGTGGCCTTATTTGGCTTCTTTGGGAAGGTGATGGGAACCATGTTGCCCTCAATGTACTGCAAGATACCACTCACTGATGCTCTCTCCTTAGGTATCATCATGGCTGCCCAAGGCATCACGCAGTTGCTTCACTTGCAGGGTCTTCAATACCTTCATATTATAGACGATCAATCATACGCTCAAATGATGGTAGCTTTAATATGGTTGACAGCAGTATCCACACCCATAGTGAAATTCCTGTATGACCCATCTAAAAGATACTTGTCCCTAAATAGGAGGAGGACCATTGAGCATGCCCCTCCCAATGCTGTACTTCCCTTGATGGCATGCATACACAGTGAAGAAAACACCCCACCCTTCATCAATGTTCTAGAAATGTCCAACTCCACAATTGAGAGTCCCATTTGCTTCTACGTCTTACACCTCGTTCAGCTAACAGGCAGATCAGCTCCAGTTTTGATAGATCATCAACCCAACAACAAGTCTAATCCATTGCACTCTAGTCATTCACAGAACATAATAAACGCCTTCAAATCGTACGAGCAACAGAACATGGGCAATGTGATGGTGAAACTCTTCACATCCGTCTCCCCTTATGAGACAATGCACGATGAGATATGCTTGCAGGCTGCAGAGAAAAGAGCATGCATGCTTATTGTGCCTTTTCACAGGCAGTGGAGAACAGGTGGGGTTTCGGAATCAGCACACCCCATTAGAGCATTGAACCGACATTTACTCAGAACCGCGCCTTGCTCCGTTGGGATCCTAGTTGAACGTGGCAACTTGACTAGTAACAACCCTTTATCATCTGTATCCTTTTACAGTGTTGGAGTTGTGTTTATAGAAGGGCCAGATGACCGTGAAGCCTTGACATATACAATGCGCATGGCTGATCATCCCAATGTAAAGGTCACGGTAATTCGATTAATGGAGCCTCGCAGGAAGAGTAGAAATTTGATCAATAGAGACCCTGATGGTGACTTGATTCACAAGTTTAAGGTTGACTACATCCAAATCAAACGCCACGATTACAGAGAGGAAGTTGTGAGGGACAGTGAGGAAATGATCAGTGTCATAAGGTCACTCGAAGGTTGCTATGATTTGATTTTGGTGGGTAGACGCCACGAAAGTGAGTCTTCATTGTTTAGTGGGTTGACAGAGTGGAATGAGTATCCAGAACTTGGTTCTGTAGGAGACATGTTAGTGTCTTCGGATTCTACTTTTGACGGGTCTGTGTTGGTGGTGCAGCAACAGAATAGGCTAGGGGTTGGTCATCATGATTTGCATCTAAACAATTCCTTCTTTTCCAAGCAAGAACCCTTAACCATTTTGGAAGTGCACAGTGATACAAAGGTGGTTCCAATAGTTTAA 2112 0.4384 MMFLFSMGVKIDISMVMRTGKKTWAIGVCSCILPLIFSIFCALVLRQLLSPETDLYKSLLYIAAFSSTGSFQVTASLLEDFKLLNSEVGRLAISSSMVNGTLSALWQTIVVSRMQTRVFKPKDKPSKWKGISLVVMVIFIVCILRPIMLWMIRKTPKGKPIKESYIVSIYVMVLVCSLFGEFIGEHFMIGPMILGLAVPEGPPLGSALVERLDTMISGVLMPLFYFSSSARFKLHLVDGYSFAIVQPVALFGFFGKVMGTMLPSMYCKIPLTDALSLGIIMAAQGITQLLHLQGLQYLHIIDDQSYAQMMVALIWLTAVSTPIVKFLYDPSKRYLSLNRRRTIEHAPPNAVLPLMACIHSEENTPPFINVLEMSNSTIESPICFYVLHLVQLTGRSAPVLIDHQPNNKSNPLHSSHSQNIINAFKSYEQQNMGNVMVKLFTSVSPYETMHDEICLQAAEKRACMLIVPFHRQWRTGGVSESAHPIRALNRHLLRTAPCSVGILVERGNLTSNNPLSSVSFYSVGVVFIEGPDDREALTYTMRMADHPNVKVTVIRLMEPRRKSRNLINRDPDGDLIHKFKVDYIQIKRHDYREEVVRDSEEMISVIRSLEGCYDLILVGRRHESESSLFSGLTEWNEYPELGSVGDMLVSSDSTFDGSVLVVQQQNRLGVGHHDLHLNNSFFSKQEPLTILEVHSDTKVVPIV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2726 703 PANTHER CATION/H+ EXCHANGER 2 1 688 - -
Ssu6g2726 703 Gene3D - 1 335 IPR038770 -
Ssu6g2726 703 Pfam Sodium/hydrogen exchanger family 2 323 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu6g2726 703 PANTHER CATION/H + ANTIPORTER 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2726 Ssu-Chr6 63202287 63205310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2726 1 664 Antiporter Super Family AT2G13620 35.414 2.63e-141 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2726 - - gmx:100790969 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2726 6 63202287 63205310 Ssu6g2726 6 63202287 63205310 ECH
Ssu9g1264 9 46293109 46296771 Ssu6g2726 6 63202287 63205310 PCT