Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2723 ATGGCTTATACAATCCACTTCATCATTTTGATGCACGTTTGtaccattgttgttgttacGAGCATTAGCAATGACTTGACGAGACCCAAGTTCTCATCCATTCTAGTCTTTGGGGATTCAACGGTAGACACGGGCAATAACAACTACATCAGTACTTTGGCCAAGGGAAATCATTTACCTTATGGTAAGGATTTCCCTGGTCACGTGCCTACTGGTAGATTTTCTAATGGAAAATTGGTTCCTGACTTTATCGCCTCTATGTTGAACCTCAAAGACACTGTCCCTCCTTTCCTTGACCCAAACCTATCAGATGAAGAACTTCTAACAGGTCTTAGCTTCGCATCTGGGGGATCAGGTTTTGATGACTTGACTACGGCTTTATCTGGTGCCATAGCAGTGTCTAAGCAAATTGAACACTTCAAAGTTTATGTAGCAAGGCTCAGGCGCATTGCAGgggaaaatgaaattaaacgaATACTTGGAGATGCTCTGGTTATTATTAGTGCAGGAACTAACgactttctcttcaatttttatGACATTCCCACTAGAAAATCGGAGTTCAACATTGATGGATACCAAGATTATGTGCAGAATAGGCTTCAAATCTTCGTTAAGgaaCTCTACGACCTTGGATGCAGAAAATTTGCTGTCACTGGTCTTCCTTCCATTGGTTGCATACCCATTCAAATAACAGCAAAGTTCGTAAGTTTGAAGGATCGGAAATGTGTAGAGGATGAGAATTCAGATGCGAAGCTCTACAATCGAAAATTAGCATGGCGGTTGCTTAAAATACAAGCAATGCTTCCCGGAAGCAGAGTTATTTATACAGATGTATATGACCCATTGATCAACCTTATCCATCAACCAGAAAAATATGGTTTCAAGGAAACGAGTAAAGGGTGTTGTGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAAATCACACCGATATGTGAAGACCCTTCGAAATATGTATTTTGGGACAGTGTCCATCCAACGGAAGTAGCCTACCAGTATATTGCCAAATACGTAGAAATGGAATATTTAAAGCCTTATGTGCTATTTTTCGGTTCAAAAACACGTATAGCAATGAGACCCACACTCCctcttatcattttaattcatgttTGTGCCATTGTTGTTTCTATGAGCAATACTATGCCCAATTTTTCATCCATTCTAGTCTTTGGGGATTCTACAGTGGACACTGGCAATAACAACTACATCAAGACTTTGGCCAGGGGAAATCATTTGCCCTATGGCAGGGATTTCCCCGGTCATGTGCCCACTGGTAGAATTTCGAATGGAAAATTGGTTCCTGATTTCATTGCCTCTGCACTGAATCTCAAAGACACTGTCCCTCCTTATTTGGACCCAAACCTATCAAAAACGGGTGTTTGCTTCGCATCTGCAGGAGCAGGTATTGATGATTTGACTGCGGCTTCATTTAATGCTCTATCAATGTCCAAGCAAATTGAATATTTCAAAGCTTATGCAGCAAAGCTCAAGCAAATTGTAGGggaaaatgaaactaaacaAATACTTGGAGATGCTCTTGTTATTTGTGTAGGTGCTAATGACTTCATTCTCAATTTCTATGACCTTTCCCATGCAAGAGTGACTTTCAGCATTAATAAATACCAAGATTATCTGCTTGATAGGCTTCAAATCTTCATTAAGGACCTATATGACCACGGATGCCGAAAAATTGGTGTTGCTGGGCTTGCTCCCATTGGTTGCTTACCTTTTCAAATAACGATAAAGCTTGAAGGGAATAGGAAATGTGTAATGGATGAAAATTCTGATTCTGAGCAATATAATCGAAAATTGGCGCAGCGATTGCCTCAAATGCAAGCTATGCTTCCCGGAAGCAGACTTGTTTATGCTGACTTATATTACCCCATACTCAACCTAATCAATCATTCTGAAAAATATGGTGAGCAATATTTAtga 1962 0.3838 MAYTIHFIILMHVCTIVVVTSISNDLTRPKFSSILVFGDSTVDTGNNNYISTLAKGNHLPYGKDFPGHVPTGRFSNGKLVPDFIASMLNLKDTVPPFLDPNLSDEELLTGLSFASGGSGFDDLTTALSGAIAVSKQIEHFKVYVARLRRIAGENEIKRILGDALVIISAGTNDFLFNFYDIPTRKSEFNIDGYQDYVQNRLQIFVKELYDLGCRKFAVTGLPSIGCIPIQITAKFVSLKDRKCVEDENSDAKLYNRKLAWRLLKIQAMLPGSRVIYTDVYDPLINLIHQPEKYGFKETSKGCCGTGLFEVTPLCNEITPICEDPSKYVFWDSVHPTEVAYQYIAKYVEMEYLKPYVLFFGSKTRIAMRPTLPLIILIHVCAIVVSMSNTMPNFSSILVFGDSTVDTGNNNYIKTLARGNHLPYGRDFPGHVPTGRISNGKLVPDFIASALNLKDTVPPYLDPNLSKTGVCFASAGAGIDDLTAASFNALSMSKQIEYFKAYAAKLKQIVGENETKQILGDALVICVGANDFILNFYDLSHARVTFSINKYQDYLLDRLQIFIKDLYDHGCRKIGVAGLAPIGCLPFQITIKLEGNRKCVMDENSDSEQYNRKLAQRLPQMQAMLPGSRLVYADLYYPILNLINHSEKYGEQYL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2723 653 CDD SGNH_plant_lipase_like 33 347 IPR035669 -
Ssu6g2723 653 PANTHER GDSL ESTERASE/LIPASE EXL3 388 649 - -
Ssu6g2723 653 PANTHER GDSL ESTERASE/LIPASE EXL3 24 346 - -
Ssu6g2723 653 CDD SGNH_plant_lipase_like 395 649 IPR035669 -
Ssu6g2723 653 Pfam GDSL-like Lipase/Acylhydrolase 34 347 IPR001087 GO:0016788
Ssu6g2723 653 Pfam GDSL-like Lipase/Acylhydrolase 396 636 IPR001087 GO:0016788
Ssu6g2723 653 SUPERFAMILY SGNH hydrolase 395 582 - -
Ssu6g2723 653 Gene3D SGNH hydrolase 23 351 IPR036514 -
Ssu6g2723 653 Gene3D SGNH hydrolase 384 652 IPR036514 -
Ssu6g2723 653 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 388 649 - -
Ssu6g2723 653 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 24 346 - -
Ssu6g2723 653 SUPERFAMILY SGNH hydrolase 33 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2723 Ssu-Chr6 63115500 63124473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2723 374 649 Pollen Coat Proteome AT1G75910 34.737 8.66e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2723 - - aprc:113874434 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2723 6 63115500 63124473 Ssu6g2723 6 63115500 63124473 ECH