Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2721 ATGCAACAACTCATGAAGGTGTTTCAGCAGGGTGATTCGAATCTCACCAACATGGTTTTGGAGCGTACAAAGGAATACCTTAAAGATGAATCTGAACTAGCTGGTATTGACCATAACTTTGTGATAGATGCGCTACCATCGGGTAAAATCCACGACCTTCAGGAAACTATAAAGCTGATGGTGGGCGATGGGCTTGAGAAAGAGTGCGGCGACGTGTACTGTAATTGGCGGAGGGAAAGCTTAGAGGAGTGCTTAAAAAATTTGCTAGGGTTGCAAGGGATCAACAACATCGAGGAGAAACGTGAACAGAGGGAGTTTCAGTATTACATTTTTAGATGGATTAAAGCTGTGAATGTGGCTGTTAGGATTCTATTTCCCAGTGAGCGACGACTCTGTGATTGCGTCTTCTCGGGGTTCTCTTCTGTCGCGGGTCTCTGTTTCACTGAGGTTTGTTGGGAACCCACGGTTAAAATGCTGAATTTTGCCGATGCGGTTGCGCGTGGGAGCCCTTCGGAGTGGCGTTTGTCCAAAATCCTTGACATGTTTGAGACACTGCATGGCCTAATTCCCGAGTTTCAATCATTGTTTCCGGAGTCACTGGGAAAGGAAGCAATGACGGTCCACGATAAACTAGGGGAGGCAAGCAGGGACATTTTCATGAACATGGAAAATGTGATTTTCCATGTCCCAGAGGCCAAGGTAACTGCTCCCGCAGATGGCCGGGTTCATCTAATGACCAAATATGTCATTCGCTACCTCGTTTTTGCTAGTCGGGCACGACAGATCTTGGAGCAAATTTTAGAACAATACCCCAAGTTTGCTAATGAGGCGGGAAAATCATCTTCAGTTTCTGATCAGATTGATCGAATAATGAAGCGATTGGAGACAAAACTGGTGGCGATGTCCAAAAACTACGAGAACCCTGCTTTAGTTTACTTTTCATGA 945 0.4561 MQQLMKVFQQGDSNLTNMVLERTKEYLKDESELAGIDHNFVIDALPSGKIHDLQETIKLMVGDGLEKECGDVYCNWRRESLEECLKNLLGLQGINNIEEKREQREFQYYIFRWIKAVNVAVRILFPSERRLCDCVFSGFSSVAGLCFTEVCWEPTVKMLNFADAVARGSPSEWRLSKILDMFETLHGLIPEFQSLFPESLGKEAMTVHDKLGEASRDIFMNMENVIFHVPEAKVTAPADGRVHLMTKYVIRYLVFASRARQILEQILEQYPKFANEAGKSSSVSDQIDRIMKRLETKLVAMSKNYENPALVYFS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2721 314 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 31 313 - -
Ssu6g2721 314 SUPERFAMILY Cullin repeat-like 7 313 IPR016159 -
Ssu6g2721 314 Gene3D Exocyst complex component Exo70 1 313 - -
Ssu6g2721 314 Pfam Exo70 exocyst complex subunit 112 313 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2721 314 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 313 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2721 Ssu-Chr6 63101743 63102687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2721 37 312 EXO70 exocyst subunit family AT5G58430 49.645 2.31e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2721 K07195 - gmx:100788866 499.975