Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2717 ATGTTTGCCTGCGGGTTCGGGAAGGAGTGGTCGCACGTGTACACCAGTCGCCGGAGGGAGTTCTTGGAGGAAAGCATCTCAAGATTAGGATTCCAGAAGCTTAGCATCGAGGACATTTACGAGAAACTGTGGCAGGACCTTGAAGACGAGATTAAAAAGTGGATTAAAGCTTCCAATGTTGCATTAAAGATTCTCTTCCCCGACGAGCGACGACTCTGCGACCGCGTCTTCTTCGGATACTCCTATGCCGCCGATATCTCGTTCATGGAGGTTTGCCAAGTATCCGCGATTCAGTTGTTGAATTTCGCTGAATCCCTCGCGATTGTGAGCCGTTCGCCAGAACGGTTGTTTGGAATCCTCAAGGTGTTCGAGACATTAGGTGACCTAATTCCAGAGTTTGAGGCTCTGTTTTCTGATCAGTTCAGTGTGTCTCTCAGGAATGAAGCAATTACTGTTTGGAAGAAATTGGGGGAAGCGATTAGAGGCATTTTCAAGAACTGGATAATTTGA 510 0.4745 MFACGFGKEWSHVYTSRRREFLEESISRLGFQKLSIEDIYEKLWQDLEDEIKKWIKASNVALKILFPDERRLCDRVFFGYSYAADISFMEVCQVSAIQLLNFAESLAIVSRSPERLFGILKVFETLGDLIPEFEALFSDQFSVSLRNEAITVWKKLGEAIRGIFKNWII 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2717 169 Pfam Exo70 exocyst complex subunit 52 166 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2717 169 Gene3D Exocyst complex component Exo70 1 168 - -
Ssu6g2717 169 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 165 IPR004140 GO:0000145|GO:0006887
Ssu6g2717 169 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 165 - -
Ssu6g2717 169 SUPERFAMILY Cullin repeat-like 1 166 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2717 Ssu-Chr6 63034020 63034529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2717 1 164 EXO70 exocyst subunit family AT5G58430 72.561 8.59e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2717 K07195 - gmx:100803694 265.388