Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2716 ATGGAACTGGAGAATTCGATTCGCCGAGACCCCGTGGAGATGGCAGCCCCCAGTGGTGGGCTTCATCCAATTACTCGCTATGTGATGAACTACCTCCGCGTTGCATGCCAGTCACGGCAGACCTTGGAGCAAGTTTTTGAAGACTATGGGCATCCGTTGAAAGAGTATCCCAAGCTTGATGATAGAGTTCCGTCCTCTTCCTCTCTGTCAGTGCAAATGGATTGGATTATGGAGCTGTTGGAGAACAATTTGGAAGCGAAGTCCAATATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAACGGCAGGTACATTGTTCAGAAGACCAAGGATAATGAATTGGGAACTCTCTTGGGGGATGATTGGATCCGAAAACACACCGCAAAAGTTCTGCAATTCCATGTGCACTATCAAAGAAGCTCGTGGAATAAGGTATTGAGGATTTTGAAGCTGGATAGGAATGGGTCAGTGCCCCCTAATGGCTTGGCAAACTCAATGAAGGAGAAGCTCAAGTCGTTTAACACAGCGTTCGAGGAAATATGCAGGGAACAGTCTTCGTGGTTTGTCTTTGATGAGCAGGTTAGGGAAGAAATAAGAATTTCCCTTGAGAAAATCTTGTTGCCTGCGTATGTAAACTTCGTTGGGAGGTTCCAGAGTGTTCCTGAGCTTGGTAAGCATGCTGATAAGTATATTAAGTATGGAACGGAAGACATTCAAGCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAGGCTGGTCCCCTTGTTCATCTCCTTCCTCTTTGGCATCCACTTCTCCAATGCATCAACACACTCGTCCATTCTTTATCCCAAGTTTCTTCCCCAACAAGACACAACCCATCCTTTTCTTCAACCACCACCAAGAACCGCCCCTCTTCATCGACCTCCTCCACCTTCTTCTCCGTCCATGGTCATCGATACCATTTCAGGAACTGCCGTGACCACGTCTAATTCTGCATCTAACATGACCATCTCTCCCCGAAATCCTCCCTCTTCCTCGAACTCCTTCTCTCCAACGACCACAGAGTTTGCGAAATGCACAACAGCCTCGTTTGCATCACCTTCTCAAATTCTCCCTTTCCAGTCCCAATCTTGCCTTGTGCCCTCTTCGCTTTATTCCCTTCTTGACAACTTTTTACAAGAGCAAAGAAATTGGGTTTGA 1209 0.464 MELENSIRRDPVEMAAPSGGLHPITRYVMNYLRVACQSRQTLEQVFEDYGHPLKEYPKLDDRVPSSSSLSVQMDWIMELLENNLEAKSNIYKDPALCYVFLMNNGRYIVQKTKDNELGTLLGDDWIRKHTAKVLQFHVHYQRSSWNKVLRILKLDRNGSVPPNGLANSMKEKLKSFNTAFEEICREQSSWFVFDEQVREEIRISLEKILLPAYVNFVGRFQSVPELGKHADKYIKYGTEDIQARLNDLFQGSSGSTGSRRLVPLFISFLFGIHFSNASTHSSILYPKFLPQQDTTHPFLQPPPRTAPLHRPPPPSSPSMVIDTISGTAVTTSNSASNMTISPRNPPSSSNSFSPTTTEFAKCTTASFASPSQILPFQSQSCLVPSSLYSLLDNFLQEQRNWV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2716 402 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 253 IPR004140 GO:0000145|GO:0006887
Ssu6g2716 402 Gene3D Exocyst complex component Exo70 1 259 - -
Ssu6g2716 402 MobiDBLite consensus disorder prediction 294 317 - -
Ssu6g2716 402 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 253 - -
Ssu6g2716 402 SUPERFAMILY Cullin repeat-like 1 249 IPR016159 -
Ssu6g2716 402 MobiDBLite consensus disorder prediction 332 355 - -
Ssu6g2716 402 Pfam Exo70 exocyst complex subunit 1 247 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2716 402 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2716 Ssu-Chr6 63012178 63020887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2716 1 253 EXO70 exocyst subunit family AT5G58430 65.354 1.96e-110 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2716 K07195 - gmx:100803694 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2716 6 63012178 63020887 Ssu6g2716 6 63012178 63020887 ECH