Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2715 ATGTTGTTTCGAGTGGAACTCGACTCagattttttaaacaatatcttaGTAGTGATTGAAGTCAATTCGCAACAACTGGCCCGTACTGATATTGATGCAGCAACTCACGACTTATCTGAAGGAGCTTCAGCGGAGCAACATATCGTCATCGACGCGCAACGTGCTGATATTGCTAGTATGATGCAACAACTCATGACTTGTATGGAGGCGATTCAGCAGGGCAATTGGAATCTCACCGACATGCTTTATGTGCATATGAAGAAATACCTTGAAGGTAATTCTGAACTTGCAGGGATGGATCGTAGCTTATATGAAGGCGCTTCAACGGGGCAACATTTCGGCATCGATGCGCCGTCGTCGGGGACAGTCGACGACCTTCACGAGATCGCAAAGCGAATGTTCGCTGGCGGGTTTGGGAAGGATTGGTCGCACGTGTACTCCAGTGGCCGGAGGGAGTTCGTGGAGGAATGCATCTCGAGATCGGGGTTCCAGAAGATTAGCATCGAGGACATTTCCAAGATGCCGTGGCAGGACCTCGAAGACAAGATTGAACGATGGATTAAAGCTTCCAGTGTTGCATTCAGGATCCTCTTCCCCAGCGAGCGGCGACTCTGCGACCGCGTCTTCTTCGGATTCTCCTACGCCGCCGATGTCTCGTTCATGGAGGTTTGCAAGGCATCCGCGGTTCAGTTGTTGAGTTTCGCTGAAGCCCTCGCGATTGCAAGCCGTTCGCCAGAACGGTTGTTTAGAATCCTCGACGTGTTCGAGACATTGCGTGACTTTAGTTTCAGAGTTTGA 798 0.4962 MLFRVELDSDFLNNILVVIEVNSQQLARTDIDAATHDLSEGASAEQHIVIDAQRADIASMMQQLMTCMEAIQQGNWNLTDMLYVHMKKYLEGNSELAGMDRSLYEGASTGQHFGIDAPSSGTVDDLHEIAKRMFAGGFGKDWSHVYSSGRREFVEECISRSGFQKISIEDISKMPWQDLEDKIERWIKASSVAFRILFPSERRLCDRVFFGFSYAADVSFMEVCKASAVQLLSFAEALAIASRSPERLFRILDVFETLRDFSFRV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2715 265 Gene3D Exocyst complex component Exo70 39 264 - -
Ssu6g2715 265 SUPERFAMILY Cullin repeat-like 62 263 IPR016159 -
Ssu6g2715 265 Pfam Exo70 exocyst complex subunit 184 262 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2715 265 PANTHER EXOCYST COMPLEX PROTEIN EXO70 90 261 IPR004140 GO:0000145|GO:0006887
Ssu6g2715 265 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 90 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2715 Ssu-Chr6 63009064 63012086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2715 115 261 EXO70 exocyst subunit family AT5G58430 72.109 5.04e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2715 K07195 - gmx:100803694 230.72