Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2714 atgtccGAAAATGGGGAAGAGAAGTTACTCGCTGTGGCGCGGCACATAGCGAAAACGCTGGGCCACAACAACACCATGTCCGATGACATTTTCCAAATACTCTCCAACTTCGACGGAAGGTTCTCGAGAGAGAACCTTTCCGAAAAGGGCGCAGATTCCGATTCCAGAGGCTGCGCCGCACTGGATCACTCCCTCAAATCCCTTGACCGCCGGATCTCTCACTACGTCTCCTCCGACCGCCCAATCTGGGCGGACGCCGCCGACTCCGCCGCCTTCCTCGACGCCGTGGATGAGCTAGTCGCCGCCGTCGCCGAGTGGAACCACCTTGCCTCCGACAAGTCCGTCGCCGCGTGCCTCGTCCGCGCCGAGGACATGCTCCAGCAAGCCATGTTCCGCCTCGAGGACGAGTTCCGCTCGCTCATCGAGCGCGGCGGCGAGTCGTTCGGCCTCACTCGGAGCTACCGCAACGGCGAAGAGAATTTACCGTTCGAGtcggaggaggaggaggaagaagaagaagaagcgaGGAACGGCGGCggagaagaagaggaacaaATTCCGGTGGCGCTGCCGGTCACCGACTTCGACATCGTCATCGACGCGCTGCCGTCGGGGACGATCAACGACCTCCACGAGATCGCGAAGCGAATGGTTGCCGGCGGGTTCGGGAAGGAGTGTTCGCACGTGTACAGCAGCTGCCGGAGGGAGTTCCTGGAGGAAAGCGTGTCGCGGTTAGGGTTACAGAAGCTCAGCATCGAGGACGTGCACAAGATGACGTGGCAGGACCTCGAGGACGAGATCGAGAAATGGATTAAAGCTTCCAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGCGACCGCGTCTTCTTCGGATTCGCCTCCGCCGCGGACTTCTCGTTCATGGAGGTCTGCCGTGGATCCGCGATTCAGCTGCTGAATTTCGCCGACGCCGTAGCGATTGGGAGCCGTTCGCCCGAGCGGTTGTTCAGAATCCTCGACGTGTTCGAGACGCTGCGTGACCTGATTCCGGAGTTTGAGGCTCTTTTCTGTGATCAGTTCAGCGTGTCGCTCAGGAATGAAGCCGTTACTATTTGGAAGAGGTTGGGGGAAGCGATTAGGGGAATTTTTATGGAGCTGGAGAATTTGATTCGCCGGGATCCGGCGAAGGTGGCGGTTCCCGGCGGCGGACTTCATCCGATTACGCGCTACGTGATGAACTACCTCCGAGCCGCGTGCCGGTCACGGCAGACGTTGGAGCAAGTTTTTGAAGACTACGGGTTGAAGGATTATCCCAAGCTTGATGATAGGGTGCACTCTTCTTCCTCTCTGTCGGTGCAAATGGATTGGATTATGGAGCTGTTGGAGAGCAATTTGGAAGCGAAGTCCAAGATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGCAGGTACATTGTTCAGAAGACCAAGGATAGTGAATTGGGAACCCTGTTGGGGGATGATTGGATCAGAAAACACGCCGCAAAAGTTCGGCAATTCCATGTGCACTATCAAAGAAGCTCGTGGAATAAGGTAGTGGGGATTCTGAAGCTGGACAATAATGGGTCAGTGCCCCCTAATGGCTTGGCAAAGTCAATGAAGGAGAAGCTCAGGTCGTTTAACGCGGAGTTCGAGTTAATATGCAGGGAACAGTCTTCGTGGTTTGTCTTTGATGAGCAGCTTAGGGAAGAAATAAGAATTTCCCTTGAGAAAATCTTGCTGCCTGCATATGGAAACTTTGTTGGGAAGTTCCAAAGTATTCCGGAGCTTGGTAAGCATGCTGATAAGTATGTTAAGTATGAAGCGGAGGAAATTCAAGCAAGACTCAATGACTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAAGTGA 1917 0.53 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGADSDSRGCAALDHSLKSLDRRISHYVSSDRPIWADAADSAAFLDAVDELVAAVAEWNHLASDKSVAACLVRAEDMLQQAMFRLEDEFRSLIERGGESFGLTRSYRNGEENLPFESEEEEEEEEEARNGGGEEEEQIPVALPVTDFDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEDVHKMTWQDLEDEIEKWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFCDQFSVSLRNEAVTIWKRLGEAIRGIFMELENLIRRDPAKVAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGLKDYPKLDDRVHSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKTKDSELGTLLGDDWIRKHAAKVRQFHVHYQRSSWNKVVGILKLDNNGSVPPNGLAKSMKEKLRSFNAEFELICREQSSWFVFDEQLREEIRISLEKILLPAYGNFVGKFQSIPELGKHADKYVKYEAEEIQARLNDLFQGSSGSTGSRK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2714 638 MobiDBLite consensus disorder prediction 162 179 - -
Ssu6g2714 638 MobiDBLite consensus disorder prediction 158 185 - -
Ssu6g2714 638 Pfam Exo70 exocyst complex subunit 269 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2714 638 Gene3D Exocyst complex component Exo70 82 637 - -
Ssu6g2714 638 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 628 - -
Ssu6g2714 638 SUPERFAMILY Cullin repeat-like 83 627 IPR016159 -
Ssu6g2714 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 628 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2714 Ssu-Chr6 63000174 63002090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2714 1 631 EXO70 exocyst subunit family AT5G58430 70.523 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2714 K07195 - gmx:100803694 1114.37