Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2711 ATGGGTTGTATAGAGGCTCTTAAGAAGGAAAATGGGTCCATTACCAGCACGATTTCCATTCATGTAGACGAATACCTTAAAGCTAATGTTCTTGATGAGGACCAGATTTCGGTGCCCAAGTTGCATCACGACGACAACTTGTTGGTGGATTCGTTGCCGTCAGGAATTATCAACGACCTTCATGAAAGCGTAAAGCAGATGCTGTTAGATGGGTTTGAGAAGGAATGCTTACACGTGTACAGTAGTTGCCGGAGGGAGTTTCTGAAGGAGAGTCTATCGACATTTGGGTTGCAATTTCAAGAGCTCAACATGGAGGACACTGACAAGATGGAGAAGATTGATAGTTGGATAAAAGCTTCGAACGTAGCTGTGAGGATACTCTTTCCCAGTGAAAGGAAACTCTGCGATCGTGTCTTTAAAAGTTCCATTTCCTCTTGGGAGTTTGTTTTCACTGAGGTTTGCACGGAATTGGTGACTAGCCTACTGAGCACTGCCCTTGCCTTGGCAAATTGGAGCCATTTCATCCGCAACACATTGCAGGAGCTGATACAAGAGTTCGAATTATGTACAACACTTAGACATAATGAAGTGGACCTGATAAGGCAGAGATTGCGCATTTATGAGGCATCAGAAAAAGTATCACTCATTCCCGGTGGCGGGCTTCATCCGATTACCCTTGAAGTGATGTACTACATTTACTTTGTTTACAAAAATAGTACATTTGATAAACTTAGCAAAGGTTTTGAAGAGGGAAAGCTTTCAGCTCCTATGTACATGGCTAGGATGACAGAGCTGTTAGAGAGCAGTTTGGAAGCCAACTCGAAAAATTACAATAACCTTGTAGTGACGCCCTACTTATATTCTGTTTTCAAAATTAGGGATAGCAAACTTAGGCAAGGTTTAGAAAAGGGAAAGCTTTTATCGTCTGTGCACGTAGCCAGGATGACAGAGCTGTTAGAGAGCAGTTTGGAAGCCAACTCCAAAAATTACAATAACCCTACTTTGGGTTATGTTTTCATCATGAACAATCGGAGATTAACTTGA 1044 0.4215 MGCIEALKKENGSITSTISIHVDEYLKANVLDEDQISVPKLHHDDNLLVDSLPSGIINDLHESVKQMLLDGFEKECLHVYSSCRREFLKESLSTFGLQFQELNMEDTDKMEKIDSWIKASNVAVRILFPSERKLCDRVFKSSISSWEFVFTEVCTELVTSLLSTALALANWSHFIRNTLQELIQEFELCTTLRHNEVDLIRQRLRIYEASEKVSLIPGGGLHPITLEVMYYIYFVYKNSTFDKLSKGFEEGKLSAPMYMARMTELLESSLEANSKNYNNLVVTPYLYSVFKIRDSKLRQGLEKGKLLSSVHVARMTELLESSLEANSKNYNNPTLGYVFIMNNRRLT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2711 347 Pfam Exo70 exocyst complex subunit 115 169 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2711 347 Pfam Exo70 exocyst complex subunit 203 343 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2711 347 SUPERFAMILY Cullin repeat-like 35 344 IPR016159 -
Ssu6g2711 347 Gene3D Exocyst complex component Exo70 4 299 - -
Ssu6g2711 347 PANTHER PROTEIN, PUTATIVE-RELATED 285 346 - -
Ssu6g2711 347 PANTHER PROTEIN, PUTATIVE-RELATED 36 281 - -
Ssu6g2711 347 PANTHER EXOCYST COMPLEX PROTEIN EXO70 285 346 IPR004140 GO:0000145|GO:0006887
Ssu6g2711 347 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 281 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2711 Ssu-Chr6 62914894 62916513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2711 32 345 EXO70 exocyst subunit family AT5G58430 37.249 8.73e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2711 - K07195 ccaj:109807809 472.241