Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2710 ATGGGGGGCTTTTTACCGTCACTTCCACTTGCGTCAGAGGAAACCAGTGGCAATGCTTCTGATTCTCCCCAAACTACTGGTAATGCTCATTCACGAGCTGATGCAACTCAAGTAACCCAAGCTGCTTCACGTTCACAACAAGGCAATAGTGATAGAGGTCTTATCAGGGCCCGGTATATGGGTCATATTGAGAAGCTTAAGAAGAAGAATGAGAAGCTTATCAACATCATTTCCAAGCATGTCAGTGAATTTCTTAAGGCTAATGTTGTGATCGAAGATCAGATTCCAGTGCCGGAATTGCAAGCTGATGACAACTTGGTGGCGGATGTGTTGCCGTTGGAAATTATCAGCAACCTTCGTGAAACCGGAAGGCTGATGTTTCAGAATGAGTGCATCAACGTGTACAGTAGTTGCCGGAGGGAGTTCCTGAAAGAGTGTCTGTCAAAGTTTGGGTTGCAAGTTGGAAAGCTCAACGTGGAGGACATTGATAAGATGGAGAAGATTGAGAGTTGGATAAAAGCTTTGAACGTAGCTGTGAGGATACTCTTTCCCAATGAAAGGAGACTCTGCGATCGCGTCTTCTCGTCATCTTATGCTGCGGATATCTCTTTCGGCAAGGTTTGCAGGGAATTGACTATTAGTCTACTGAGATTTTTAAATACCTTAGCAACTGAGAATCATTCCCCGTATCATTTGTTCCATGTCATCCCCAAAGTGTTCAAGACTTTGAGTGACCTGTTTCCAAATTTCAATTCACTGTTTTATGATCAGTTGTTCAGTGAATCACTCAGAAATGATGCGGTCCTTGTTGGGAAGAGATTGGGCACTTTTGTGAAGTTGGAGAGTCTTATTCGCCGTGAGGTGGCGCAGGAAACTGTTCCGGATGGTGGGATTCATCCAACTACCCACAAAGTGATGGACTACCTCAGAGATGTTTTCACAGATAACGAGAATTTTCAATTAGAAAGGGAATATCTTCATTTTCTGACCAGGTAG 996 0.4378 MGGFLPSLPLASEETSGNASDSPQTTGNAHSRADATQVTQAASRSQQGNSDRGLIRARYMGHIEKLKKKNEKLINIISKHVSEFLKANVVIEDQIPVPELQADDNLVADVLPLEIISNLRETGRLMFQNECINVYSSCRREFLKECLSKFGLQVGKLNVEDIDKMEKIESWIKALNVAVRILFPNERRLCDRVFSSSYAADISFGKVCRELTISLLRFLNTLATENHSPYHLFHVIPKVFKTLSDLFPNFNSLFYDQLFSESLRNDAVLVGKRLGTFVKLESLIRREVAQETVPDGGIHPTTHKVMDYLRDVFTDNENFQLEREYLHFLTR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2710 331 Coils Coil 63 83 - -
Ssu6g2710 331 PANTHER EXOCYST COMPLEX PROTEIN EXO70 93 315 IPR004140 GO:0000145|GO:0006887
Ssu6g2710 331 Pfam Exo70 exocyst complex subunit 170 311 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2710 331 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 93 315 - -
Ssu6g2710 331 MobiDBLite consensus disorder prediction 11 52 - -
Ssu6g2710 331 Gene3D Exocyst complex component Exo70 33 324 - -
Ssu6g2710 331 MobiDBLite consensus disorder prediction 1 53 - -
Ssu6g2710 331 SUPERFAMILY Cullin repeat-like 92 311 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2710 Ssu-Chr6 62890754 62892872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2710 94 310 EXO70 exocyst subunit family AT5G58430 50.644 4.61e-64 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2710 K07195 - gsj:114376661 479.559