Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2707 ATGGGTGGTATAGAGGTGCTCAAGAGGAAGAATGGTAGTGTTATCAGCATGGTTTCCAAGCATGTAGATCGATGCCTCAAAGCTAATGTTGTTGACAAGGACCAGATTCCGGTGCCACAAATAGATCGGGACGACAACTTGGTGCTGGATGCGTTGCGGTCTGATGATGACGACTATATTGTTGGCGACCTTGGTCAAACCGCGATGCTGATGTTCACTTCCTCTGCGGATTTTGCTTTCACGGAGGTTTGCACGGAATTGGCGACTCGTCTATTGAGCACTGCCAACGCCTTGGCAAATTCCTTCCGCAACACATTGGAGGAGCTGTTGTATGAGTTCGAATTAGTGTTCTCTGGTGAGTACAGTAAATCACTCAAAAAGGATGCGCGCAGGGTTAGGAAGAGTTTGGGCATTTTTATGGATTCCGAAAATCTTCTTACTTATGGCCGCGGCAGACTTCTTCCGATTACCTATGAAGTGATGAACTACATTCGTGATAATTCCATAGATACGAAAACTAACCTTAAGCCAGCTTTAGAGTCCATAATGCTTTCACCATCTGTGCAAGTAACCAGGATAACAAGGCTGTTCGAGAGGAGTTTGAAAGCTAACTTCAAAAGTTACAgtgaGATTTGA 636 0.4465 MGGIEVLKRKNGSVISMVSKHVDRCLKANVVDKDQIPVPQIDRDDNLVLDALRSDDDDYIVGDLGQTAMLMFTSSADFAFTEVCTELATRLLSTANALANSFRNTLEELLYEFELVFSGEYSKSLKKDARRVRKSLGIFMDSENLLTYGRGRLLPITYEVMNYIRDNSIDTKTNLKPALESIMLSPSVQVTRITRLFERSLKANFKSYSEI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2707 211 SUPERFAMILY Cullin repeat-like 73 206 IPR016159 -
Ssu6g2707 211 Gene3D Exocyst complex component Exo70 65 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2707 Ssu-Chr6 62814661 62816581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2707 72 210 EXO70 exocyst subunit family AT5G58430 32.164 2.69e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2707 - K07195 gmx:102668498 189.889