Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2702 ATGGCACAAGAGGCTGATGCCTCTCCGGAAGAAGAATATCTAGAATTCCTAGTTACTCTATTCGGCGGCAATACTGACAGAGATAACAGTATCAGGGCAGGGTTCATGGGCTGTATAGAGGCGCTTAAGAAGGAGAATGGGAGCGTTATCAGCGCTATTTCCAAGCATGTAGGCGAATACTTTAAAGCTAATGTTCTTGATGAGGACAAGATTTCAGTGCCGAAATTGCATCGCGACGACAACTTGTTGGTGGATTCGTTGCCGTCGGGAATTATCAACGACCTTTGTGAAAGCGTAAAGCAGATGGTTTGCACGGAATTGGCGACTAGTCTGCTCAGCACTGCCATTGCGTTTGCAACTTGGAGCCATTTCATCCCCAACACATTGCAGGAGCTGAGACAAGTGTTCGAATCAGTGCTTCTAAATGAGTTCCGTGTCTCACTCAGAGATAATACAGCGGTCCTGATCAGGCAGATGTTGAGCATTTTTGAGGCGTTGGAAAATGTATCACTCGTTCCCCGTGGCGGGCTTCATCCAATTACCACTGAAGTGATGTTCTACATTTGTTATGCTTACAAAATTAGGGATAATGAACATAGCCAAGGTTTAGAAGAGGGAAAGCTTTCACCGCCTGTGTACATTGTTGCCAGGATGACAGAGCTGTTAGAGAGCAGTTTGAAAGCCAACTCCAAAAACTACAATAACCCTACTTTGGGTTTTTTTTCAATCATGAACAATCGGAGGTTCATAGAACTGGAGGCAAAATTGGGTGGATTGGAACCTCTGGcgataacaaaaacaaaagaaaggaagcACACTAGCACAGAACCAAAATATTACgaggactaa 849 0.4287 MAQEADASPEEEYLEFLVTLFGGNTDRDNSIRAGFMGCIEALKKENGSVISAISKHVGEYFKANVLDEDKISVPKLHRDDNLLVDSLPSGIINDLCESVKQMVCTELATSLLSTAIAFATWSHFIPNTLQELRQVFESVLLNEFRVSLRDNTAVLIRQMLSIFEALENVSLVPRGGLHPITTEVMFYICYAYKIRDNEHSQGLEEGKLSPPVYIVARMTELLESSLKANSKNYNNPTLGFFSIMNNRRFIELEAKLGGLEPLAITKTKERKHTSTEPKYYED 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2702 282 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 260 IPR004140 GO:0000145|GO:0006887
Ssu6g2702 282 PANTHER EXOCYST COMPLEX PROTEIN EXO70 69 111 IPR004140 GO:0000145|GO:0006887
Ssu6g2702 282 Gene3D Exocyst complex component Exo70 69 281 - -
Ssu6g2702 282 PANTHER PROTEIN, PUTATIVE-RELATED 109 260 - -
Ssu6g2702 282 SUPERFAMILY Cullin repeat-like 103 251 IPR016159 -
Ssu6g2702 282 Pfam Exo70 exocyst complex subunit 128 252 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu6g2702 282 PANTHER PROTEIN, PUTATIVE-RELATED 69 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2702 Ssu-Chr6 62717116 62718894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2702 103 250 EXO70 exocyst subunit family AT5G58430 34.483 2.40e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2702 - K07195 vun:114195088 147.132