Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2693 ATGGGATGCACTTCACTGCTTAGAAGCCCCAAGAAAGAACAGGAAGTACCAGATGCTATCACCTCCATATTCCCCAATTCTAACCAAGCTTACACCTATGAAGATTTCAATATTTTGGACGAGCTCGAAGGGGTCTGGAACACTAAGGAAGAACAAAAGTTGCCTCAACAAAGCTCTTCCAGTGGTGAACTTCATTGGAATTTCATGGAATGGGAGGTATTTCTCCCCACTGGagaggaaggagaagatgaaaatgaagagaaagagaaagtgagagaGAGCATGAGCAAAAGCCATTTTGAGGAGCAGcagataaagagagaaaatatttttgggtTTCGGGAAGTGGATGATGAGAAGATGATGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGACCGTGGCTCTCCATGGGCTGACGACTGTTCTCTTTCATTGGCCACCAATAATGGCTACTATATGGGAGAAGTACCAGTATGGGAAGAAGAGAGAGCAAGAAGGGAAGCAAGTGTTCTTAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCCAGAATCAAGGTCACTTTTAAATTTCCTGTTTCTTTTCGTGCCATTGGGTTTTGCAGTGTGGTCGTTTTGTTTTGTAATGAAAGCAGCTTTTCCGATATTTTTGTTGTAGGGTCGCTTTGTGAAGAGACACTGAGGTTACTCAAGAAAGATCCCAAACCGAAAATATCTTCCAAAATATCTAAGACCACTCctgtacatttatttttaattaattccaaCTCAAACATTCTTGTATTTATCCATTCAAATTATCTTTCATATCCTATagaattggaaaagaaaaaaacaaaatatctctGTTTCTAA 924 0.3539 MGCTSLLRSPKKEQEVPDAITSIFPNSNQAYTYEDFNILDELEGVWNTKEEQKLPQQSSSSGELHWNFMEWEVFLPTGEEGEDENEEKEKVRESMSKSHFEEQQIKRENIFGFREVDDEKMMALNLNLNYQEVLDAWSDRGSPWADDCSLSLATNNGYYMGEVPVWEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKVTFKFPVSFRAIGFCSVVVLFCNESSFSDIFVVGSLCEETLRLLKKDPKPKISSKISKTTPVHLFLINSNSNILVFIHSNYLSYPIELEKKKTKYLCF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2693 307 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 212 - -
Ssu6g2693 307 MobiDBLite consensus disorder prediction 77 100 - -
Ssu6g2693 307 MobiDBLite consensus disorder prediction 85 100 - -
Ssu6g2693 307 ProSiteProfiles CCT domain profile. 173 215 IPR010402 GO:0005515
Ssu6g2693 307 Pfam CCT motif 173 212 IPR010402 GO:0005515
Ssu6g2693 307 PANTHER CCT MOTIF FAMILY PROTEIN 4 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2693 Ssu-Chr6 62589028 62590381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2693 117 212 C2C2-CO-like Transcription Factor Family AT1G73870 44.348 7.49e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ssu6g2693 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2693 - - aprc:113847792 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2693 6 62589028 62590381 Ssu6g2693 6 62589028 62590381 ECH