Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2678 ATGAGAGACCTTAAGATTAGAGGCGACTTAGTAGAAGAGCAATCATGGCCAAAGAAACCCACTCTAGTGAAGCCCATTCCTCGGAGAGCTCAAGCTAGAGGGTCTATAGGCGTTGGTTCATCCTTTCAACCGTGGCGAAAACCCTATAAGCCACTTCATAAACTTGCCACCATTCCAGAAAACGATAATCATATTACAGAGGAGAACGTCGCTAATGGAGGTGCTGCTGCTAATGATCAAAACACTTCCAATGAAGCCGAAGCAAACATTGAGCAAGAAACGGTGAAGCAGCTCAAGcgAATCATCTCAAACAGACATTCTGCACGAAGATCGAGATTGAAGAAACTTGCATACATGGAGGATTTGGAAAACACAGCGAAATCTTGCAAGGACAAGATAGCCCTCCTCCATCGACAAATTGAAGCCCAACAAAACGAGCAGCGATTGTTGCAAATTGAGCATCATAGATTGAAATTCCATATGGCTGCTTGTGAAAAGCAAAGAATACTTCGAGAAGTTGAGATTGAAAAGAACAGAGCAGAAGTGGATAGGCTAAAAGAAGTACAAAGGAAATTAGCAGCTGAAGCTCAGCCAAGGAGAATGCTTAATTTGACTTCTTTGCAGCTCATGTCCAATTCCAACTTAAACCTTTCAGCCTTGGCAGGGTTGGATCGCAGAAACTGA 684 0.4298 MRDLKIRGDLVEEQSWPKKPTLVKPIPRRAQARGSIGVGSSFQPWRKPYKPLHKLATIPENDNHITEENVANGGAAANDQNTSNEAEANIEQETVKQLKRIISNRHSARRSRLKKLAYMEDLENTAKSCKDKIALLHRQIEAQQNEQRLLQIEHHRLKFHMAACEKQRILREVEIEKNRAEVDRLKEVQRKLAAEAQPRRMLNLTSLQLMSNSNLNLSALAGLDRRN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2678 227 PANTHER BASIC LEUCINE ZIPPER 34 9 198 - -
Ssu6g2678 227 SMART brlzneu 92 156 IPR004827 GO:0003700|GO:0006355
Ssu6g2678 227 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700|GO:0006355
Ssu6g2678 227 Coils Coil 119 153 - -
Ssu6g2678 227 Gene3D - 96 162 - -
Ssu6g2678 227 PANTHER ACTIVATOR OF SPOMIN LUC3 9 198 - -
Ssu6g2678 227 Coils Coil 175 195 - -
Ssu6g2678 227 Pfam Basic region leucine zipper 98 146 IPR004827 GO:0003700|GO:0006355
Ssu6g2678 227 SUPERFAMILY Leucine zipper domain 95 150 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2678 74 172 bZIP Transcription Factor Family AT3G58120 30.303 3.53e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu6g2678 bZIP_2 5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2678 - - ccaj:109816036 280.411