Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2676 ATGGCATTCAAGGAGCTCATAATCCGAAGCTATGAGGGTCAATCCGATAGAGCTCAGGTAGAAGATCTTGAGAGAAGATGCAAGGTAGGGCCATCACAAAGCGTGTTAGACACTATGGGTGACCCCATGTGTAGGATTCGAAACAGTCCCATGTACATAATGCTGGTAGCAGAGATGGACAATGAATTGGTTGGTGTCATTCAAGGCTCCATAAAAATGGTCACAGTTCATAGTCATCCTCCAAAGGATATGGCAAAGGTAGGGTATGTCTTAGGCCTCAGAGTTTCTCCCCAGAGTCGAAGAAAAGGCATTGGCTCAAGCCTAGTGCAAAGGCTAGAAGAATGGTTCACTTCCAATGATGTGGATTATGCATACATGGCCACAGAGAAAGACAACCATGCCTCGATCAATCTCTTCATGGACAAGTTTGGCTACATCCAGTTTAGGACTCCAGCTATTCTCATAAACCCAGTGAATCATCACCCATTTCAAATCTCATCTAACATAGAGATAGCCAGGGTCAAGGTTGAAAAAGCTGAATCCCTTTATAGAAGGTTCATGGGATCCACTGAGTTCTTCCCTAGTGACATAGGGAATATACTTAGGAACAAGCTAAGCTTGGGAACATGGGTGGCTTATTTCAAAGGAGATGGTGGTTTTGGTTCAGATGGACAAGTAGTCCCCAATAGTTGGGCTATGCTTAGTGCATGGAACAGTGGGGAAATCTTCAAGCTGAGGCTAGGGAAAGCACCCTTATCTTGCTTGTTATTCACAAAGAGTTGGAGCTTGATTGATAGAATCTTCCCATGCTTGAAATTGCCCACCTTGCCTAATTTCTTTAGTCCCTTTGGGTTCTGCTTCATGTATGGGGTGTACCAAGAAGGGCCATTCTCCGGGAAGCTGATGAGGGCCTTGTGCAAGTTTGTGCACAACATGGCTTCCAAGAGTGAGCATTGCAAGGTCATTGTGACGGAACTTGGAGGAAGAGACGAGCTGATTCATCATGTTCCACATTGGAAATTGCTCTCATGCCCGGACTTGTGGTGCATAAAGGCTTTGAAAAATGAAGGGACAAACACGTTTCATGAATTAACCAAAACGCCACCAAGAGCTCTCTTTGTAGACCCACGAGAGGTCTAA 1140 0.45 MAFKELIIRSYEGQSDRAQVEDLERRCKVGPSQSVLDTMGDPMCRIRNSPMYIMLVAEMDNELVGVIQGSIKMVTVHSHPPKDMAKVGYVLGLRVSPQSRRKGIGSSLVQRLEEWFTSNDVDYAYMATEKDNHASINLFMDKFGYIQFRTPAILINPVNHHPFQISSNIEIARVKVEKAESLYRRFMGSTEFFPSDIGNILRNKLSLGTWVAYFKGDGGFGSDGQVVPNSWAMLSAWNSGEIFKLRLGKAPLSCLLFTKSWSLIDRIFPCLKLPTLPNFFSPFGFCFMYGVYQEGPFSGKLMRALCKFVHNMASKSEHCKVIVTELGGRDELIHHVPHWKLLSCPDLWCIKALKNEGTNTFHELTKTPPRALFVDPREV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2676 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 148 IPR016181 -
Ssu6g2676 379 Pfam Acetyltransferase (GNAT) family 44 145 IPR000182 GO:0016407
Ssu6g2676 379 CDD NAT_SF 54 125 - -
Ssu6g2676 379 Gene3D - 7 151 - -
Ssu6g2676 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
Ssu6g2676 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016407
Ssu6g2676 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2676 Ssu-Chr6 62200299 62201598 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu6g2676 Acetyltransf_1 2.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2676 - - gmx:100799505 660.988