Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2674 ATGGCGTCGGCGTGCGTGACGGACGTTGCCCGCGCGGCTTTGTGCAGGGACGGCGCGGCGGCGGCGCATCTCAAAGTCATCTCGATCTTCGTCATCTTCGTGACCAGCACGGCGGGGATGTCGTCGCCGGTGCTCCTCGCCGGCATCTTCCGCGGGAAGCCGCTCTACGACAAGGCGATAGTCGTGATAAAGTGTTTCGCGGCGGGGGTGATCCTCTCGACCTCGCTGGTCCACGTGCTCCCGGACGCGTACGCCGCACTCGCGGACTGCCACGTGGCGTCAAGGCACCCGTGGAAGGACTTCCCCTTCGCGGGGCTCGTGACCCTGGTGGGGGCGCTCCTCGCGCTGCTCGTGGACCTCGCCGCGAGCTCGCACGTGGAGCACGCGCAGTACGCGCCGGTGGTGGCGCAGGAGAAGGAGGCGGCGGTAGAGctcggcggcggcggcggcggcggtgAGGGGGAGAGGGGCGAGGAGCTGGCGAAGTTGAAGCAGAGGTTGGTCTCGCAGGTGCTGGAGATTGGGATAATTTTTCACTCCGTCATAATTGGGGTCACCATGGGAATGTCGCAGAACGTTTGCACTATTCGGCCTCTCGTTGCTGCCTTGGCCTTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGCTGCGTCGCTCAGGCAGGGTTTAGCTTTGGAACAATTGCATACATGTGCTTCATGTTCGCGGTGACAACACCAATGGGGATAGTTTTGGGGATGGCATTATTCTCACTTACAGGTTACGATGATAGTAGCCCAAATGCCTTAATCATGGAAGGGTTATTGGGTTCAATTTCATCTGGAATACTAATTTACATGGCTCTTGTTGACCTCGTAGCTGTTGACTTCTTTCACAACAAGCTTATGAACTCCAATCCACGGTTGAAGAAAGCATCTTTTGTTGCCTTAACCCTTGGTTCTGCTGCAATGTCTATTCTCGCCCTATGGGCTTGA 975 0.5559 MASACVTDVARAALCRDGAAAAHLKVISIFVIFVTSTAGMSSPVLLAGIFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCHVASRHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAQEKEAAVELGGGGGGGEGERGEELAKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTIAYMCFMFAVTTPMGIVLGMALFSLTGYDDSSPNALIMEGLLGSISSGILIYMALVDLVAVDFFHNKLMNSNPRLKKASFVALTLGSAAMSILALWA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2674 324 PANTHER ZINC/IRON TRANSPORTER 4 324 - -
Ssu6g2674 324 TIGRFAM zip: ZIP zinc/iron transport family 11 324 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu6g2674 324 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 4 324 - -
Ssu6g2674 324 Pfam ZIP Zinc transporter 23 321 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2674 Ssu-Chr6 62172693 62178687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2674 3 324 Inorganic Solute Cotransporters AT2G30080 66.959 2.36e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2674 K14709 - gmx:100797310 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2674 6 62172693 62178687 Ssu6g2674 6 62172693 62178687 ECH
Ssu6g2674 6 62172693 62178687 Ssu9g1230 9 45358215 45364162 ECH
Ssu9g1230 9 45358215 45364162 Ssu6g2674 6 62172693 62178687 PCT