Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2673 ATGGCCAACAAACAAACCattttcttcatcatcttcCTGACCATCGTTGTCGGCGCGCTTATAATCAATGCAGTTTATTCGTTGATCCAAGCGTTGGTCCTAGCGTTGTTGCCGTTCAAGTTCTTTGTGATGGATGCTACCCTCACCCAATTCAATTACACTAACAACACCTTTGACTACAACCTCACCCTCAACATGACGGTCTCCAAAGCTATCTACTATGAATACATAATTGCAAACGTGTTGTACCAAAATGTCTCGTTTGGTTCCCAAACTGTAGAATTAATGTTCAAGAAGGGCTTCAGCAAGTGGAACATGGACCTCAAAGGTCAGCATGTGTTGGCCCTCAACACCAAtcaaattttagagtttaataaggAGAAGATATCTGGGGTTTACCACATCAATGTGAAGTTGTGCCTTAGGTCTAGGCTAAAAAATGACCAGGACAAGCCTTTGGTTCATTGTGACTTGCAGGTTCCTCTCAAATCAAGCAAAGAAATCTCACAGGCCCATGGTTTTCATGCAACCCGATGTCATTTAGGTTATGCTAATGATGACAATTGTTCCTAG 573 0.4014 MANKQTIFFIIFLTIVVGALIINAVYSLIQALVLALLPFKFFVMDATLTQFNYTNNTFDYNLTLNMTVSKAIYYEYIIANVLYQNVSFGSQTVELMFKKGFSKWNMDLKGQHVLALNTNQILEFNKEKISGVYHINVKLCLRSRLKNDQDKPLVHCDLQVPLKSSKEISQAHGFHATRCHLGYANDDNCS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2673 190 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 8 181 - -
Ssu6g2673 190 PANTHER OS05G0367900 PROTEIN 8 181 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2673 Ssu-Chr6 62131868 62132440 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2673 40 162 SNARE and Associated Proteins AT1G32270 34.783 5.23e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2673 - - aprc:113873272 119.398