Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2623 ATGGAGACCCTCCCTCTCCTCGTTGCTCTGACAGCGGCTCTATCAGCCTACTTCCTCTGGTTCCATCTCCTCGCTCGAAACCTAACCGGTCCAAAAGCGTGGCCCTTCGTGGGAAGCCTCCCGGCGCTGTTCAAGAACCGCCACCGCGTCCACGACTGGATCGCCGGCAACCTCCGCGCCGCCGGAGGCTCCGCCACCTACCAAACGTGCATCATCCCCCTCCCTTTCTTGGCGCGCAGGGAAGGGTTCTACACGGTCACGTGCCACCCCAAGAACCTCGAGCACGTCCTCCGAACCCGCTTCGACAACTACCCCAAGGGCCCCAAGTGGCAGACCGCGTTCCACGACCTCTTGGGCCAGGGCATCTTCAACAGCGACGGCGAGACCTGGCTCATGCAACGCAAAACCGCGGCTCTCGAGTTCACCACCAGAACGCTCAAACAGGCCATGTCTCGCTGGGTGAACCGCTCCATCAAGAACCGCCTCTGGTGTATCATCGACAAAGCAGCCAAAGATAACGTGTCGGTGGACCTGCAAGACCTTCTTCTGCGTTTGACCTTTGATAACATTTGTGGACTCACCTTCGGCAAAGACCCCGAAACTCTTTCCCCGGAGCTACCCGAAAACCCGTTCGCCGTTGCCTTTGACACTGCCACTGAAGCCACCATGCACAgGTTCCTCTACCCGGGTCTGGTGTGGAGGTTCCAGAAGATTCTATGCATTGGATCCGAGAAGAGGTTAAAGGAGAGCCTCCGAGTGGTGGAAACCTACATGAACGACGCCGTTGCGGATCGCAAGGAAACTCCCTCCGACGACTTGCTCTCCCGTTTCATGAAGAAACGCGACGCCACCGGCAACCCCTTCTCCGCCGCCGTGCTCCAGCGCATCGTCCTCAACTTCGTCCTCGCCGGCAGGGACACGTCATCGGTGGCCCTCACCTGGTTCTTCTGGCTCGTCACGAACCACCCACACGTGGAGGACAAGATAGTGAACGAGATAACGACGGTCCTCGCCGACACACGCGGCGGAGACAATCGGCGGTGGGCGGAGGACCCTCTCGACTTCGGCGAAGCGGACCGGCTGGTGTACCTGAAGGCCGCGCTGGCCGAAACGCTGCGCTTGTACCCGTCGGTGCCGCAGGACTTCAAGCAGGCCGTCGCCGACGACGTGTTGCCGGACGGCACGGCGGTTCCGGCGGGGTCGACGGTGACGTATTCGATATACTCGGCGGGGAGGGTGGAAGAGATATGGGGCGAGGACTGCATGGAGTTTAAACCGGAGAGGTGGCTTTCGGCTCGCGGCGACCGGTTCGAACCGCCCAAGGATGGGTTTAAGTTCGTGGCTTTTAATGCTGGACCGAGAACTTGCTTGGGCAAGGACTTGGCTTACCTCCAGATGAAGTCAGTGGCTGCCGCTGTGTTCTTGCGTTACCGGCTATCGCTGGTTCCCGGTCACCGCGTGGAGCAGAAGATGTCTCTCACCTTGTTCATGAAGAATGGGCTCAGGGTGTTCTTGCGTCCACGTAAGCTTCAAGCTGGGCCAGAGGTTGCCACGTCACCCTAA 1563 0.5995 METLPLLVALTAALSAYFLWFHLLARNLTGPKAWPFVGSLPALFKNRHRVHDWIAGNLRAAGGSATYQTCIIPLPFLARREGFYTVTCHPKNLEHVLRTRFDNYPKGPKWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLKQAMSRWVNRSIKNRLWCIIDKAAKDNVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFAVAFDTATEATMHRFLYPGLVWRFQKILCIGSEKRLKESLRVVETYMNDAVADRKETPSDDLLSRFMKKRDATGNPFSAAVLQRIVLNFVLAGRDTSSVALTWFFWLVTNHPHVEDKIVNEITTVLADTRGGDNRRWAEDPLDFGEADRLVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTAVPAGSTVTYSIYSAGRVEEIWGEDCMEFKPERWLSARGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVFLRYRLSLVPGHRVEQKMSLTLFMKNGLRVFLRPRKLQAGPEVATSP 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2623 520 Pfam Cytochrome P450 85 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 SUPERFAMILY Cytochrome P450 19 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PANTHER CYTOCHROME P450 4 510 - -
Ssu6g2623 520 Gene3D Cytochrome P450 24 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Ssu6g2623 520 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 4 510 - -
Ssu6g2623 520 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2623 520 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2623 Ssu-Chr6 61334372 61336663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2623 12 508 Cytochrome P450 AT5G58860 75.855 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2623 K15401 - gmx:100788343 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2623 6 61334372 61336663 Ssu6g2623 6 61334372 61336663 ECH