Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2616 ATGGACATGCAAATCACCACAGCAGCTACGCCTTTTATAGACCTCAAAATCAAGAGATGTCTTCTAAATACTTTGCCTCcaacattcaaatttcaaacagcAATCAAATACAGTGACTACATATCAGTGTCTGATCTGAATGAGGAACAGATAAGAATCTTTTGGAGTTCTGAGCAAAACCACCTTAGATGTGTCAACAAGGAGGAGGAAAAGGGAGgggagaaaaaggttgaaccaAAACATCCACCAAAGACGGTCAAGAATGAGAGACGTGGACTGCTTTATAAGTGTCCATCACACAATGCAACaagtagaagaagaaatttCACTGGGAAGAAATTGGATGTGTATGGTGGTTTAGAAATAAAAGCCAAGGATTTATCATCAGTGTTTCGTAATGAATTCACCAGAAATAATAGAGATATTAGAAGGGCTAAATTTTATAAGGAAGAGATTGGTTCTTTGGAGGCTCCTACAAAGCAAGCATTATTTGCTGAACCTTCAATGCTGGACCTGGTGACTTATGGTGTTGGTTGTGATGGTCTAGAGAAAAAGACAGAAAACAAAGAGGATGAGAAAAAAGCTCAACAGGATGGCAATAAAGGTGTAGAGTTGACAGAGGAAGATCAGAAAAATGAAATGGATCTTGGGACATGTGAGTTGGAGAGACACAAAAGGCTGGAGAGTCTTATAGCCAGAAGAAGAGCAAGGAAACAATTGAAGTTGCAGATTGAGAAAGGTCTAATTGATATGAAATCAGTTACACCAAGCCAGATTGCTCCACTGTTTGTTACAAGACTCAGCCATTTTGATTCTCCAAAAGAGTTTGATGGCATTGAAATGCCTGGTTCTGCCCCATCTGCTTTGAGAAGCCCATTTGATATTCCCTATGATCCTTTTGAGGAGAAACCCAATCTCACTGGGGACAGTTTTGATCAAGAATTGAAGGATTTGTTAATAGAACCCAGACAAGAAGACCTTGAAGCCAGAGAGCACAGGTTCGCACACCCAAGAGTCAGAAGGCTTCGAGGTGATATTGATAACCGCTTTGTTTTCTCCtcatcctttttttcttctttcccccCTTCTATGTTaatggaaaaagaaacaaaagaggaAACTGAGGtaaaatttgatgataaaattGAATGTATCTTGCTCATTCATGCAGGTAAAGGAAATCATGACAAGCTTGAACAATTAATATCCAAAGAAGCCAGTGAAAGTGAATCAAAAGCTTCTATTCCACCAAGTGAAGGAGAGGAAACAGCACATGAAGAGAATGGCAAATGTGAAATTGATAATATGGCTGAAATCACAGGTGAGGAAGTGGACAATGCTCAAGCAACAAAATCCAATTTAGACCATTCAAGTGAGCCAGACTTGATTTCAGTGATAAATGTTGAAAGAGGTGAAACTTCAGAGAAGCTAGAAGAACCAAGAGTTCCTAAGCCTCAAGAGGGGGACCTTAATTTACCAATATCAAGTACTAGTGCTACTAAAATAAATGATTCTCTGTATGAATCTCTTTCATCTCCCGTTGATAAGAACCAGGAAAATATCACTGGTGGCCCTATCTCTCATACCCCTTCATGCTCCTTTGCTTCTGACTTACAAGTGGAGGTTTCTGAAGTTGGTTCACCAACACTGACAGTTGATGAGAATCATGAGACCACTACAACCACTGATGGAGAATCCATGATATATGATGGGGACATTGATAAAGATGTTACTTCTGGCAGTGAAGATATGTGGGGAGCCTCACTCCATTTAAGAGAAGTACGTAGAGTAAGTGAGCAAGATATTTCAGAAGTAAATAGCTGGAGGGACATTTGTTCACCCCTTTCTCTGCAAAACATTGATGAAGAAAATGCAGCTGATGTGAGCTCTATGTCCTCAAGATCTGACATGCCTGATGATACTCCAACTTATGCAATGAGCAGTGACCATAACATCTTTGGCAAAGATTTTGGGACAGAAAAGGGTGCATCCCAACCTACTCATTCTTCAGTTGTGTCAGCACGTTGGAAGCGGTTGATGCGGTTGATGGATACCCGTCTTAATCATTCACCTCATAAAATGCATTCAGAAAAACCAGGGGAATTGTTCAACCTCTCAGAGAATTCAAGTAAGGCACAAGTTGTTAATGATGGGAACAACTCAACAGCCTCTGAGCAAGATAACACACATAACTCAAGAGGTAATGAAGAACCTGGTGCATCAGATGCAGTTATGCAACAAGAAGCAACTGATGAAGTCTCAATCAACTCAAGTTCATCATCTTCACCAAGGTCTGTATTGTCAATAACACAGAAGACCATAGCTGACCAAGTTCCCTCGTCCGCTTACAATCAAGAGACACACCTGGATGTTCAGCAATCTAACATGCAGGATGTGGCACAAGAAATATTAAATGGTGAAGGTCCACTTGACTCCATCCCTCAAAATATTCTGCCTTCCATAGATAATCCAAATGTTGAATCACATCACAGTGACTTGAATCATCCTCAGGAGGAGACTAGTCCACTGGAGAATTCCATTCAGGAATCAAATATATCTAGCAAGATGAATGATGCAGAAGTTTGTAACGAGGAAgctgaaaataagttaaagaatGATGAGAACGGTGGGGACATATTTACTCCCCTAATTAGACAAGATGCTTCAAGAGAACCCCCTAGACAAGCAGAGATGATGGCTTCAGAGGATATAAGTGAGGAATCAAGAGAAATGTTTGATgacaaaGTGCCATTGATTTCTCTAATACTAGAATCATCCTTAGAAAGTCCAGGAGAGGATGAAGAAAAGTCAGAAGCATCAGTGAGACAAGAGGCAACCACAGAACCATGTATCAGTGCTGAAACAACAGACACAAGTTCTGATgaagattttgaaagaaaatgcagTGATTTGAATGAGAATGAAGCCATACTCTCATCAAGCTTATCAGCAGGAGAAAGTGACAAGTTGAGAGAAATAGACAAGCCAAAGCATAGTTCAGGAGTGAATTATTTGCAAAGTGAGTCAATGCAGGTGGTTGAAGATCATATGGAGAAGGAAAAGCTGGATAAAGGTGATATCTCTGAAGACTCTCTATTACCAATTGCCACTGAAGTAACCAATTCTGAAGACACAGAAGGAGAATGTGACAAGAATGAAGCCACTGAGCAGGAATTGAACAAGAATGAAACCGTGGTTATGTCTGAACCTGCAGGAGAAAGTGATCAGGTAAGAAACATAGCACACATGAAAGATCCTGAAGAAAGGACTTCAACTTGA 3279 0.3849 MDMQITTAATPFIDLKIKRCLLNTLPPTFKFQTAIKYSDYISVSDLNEEQIRIFWSSEQNHLRCVNKEEEKGGEKKVEPKHPPKTVKNERRGLLYKCPSHNATSRRRNFTGKKLDVYGGLEIKAKDLSSVFRNEFTRNNRDIRRAKFYKEEIGSLEAPTKQALFAEPSMLDLVTYGVGCDGLEKKTENKEDEKKAQQDGNKGVELTEEDQKNEMDLGTCELERHKRLESLIARRRARKQLKLQIEKGLIDMKSVTPSQIAPLFVTRLSHFDSPKEFDGIEMPGSAPSALRSPFDIPYDPFEEKPNLTGDSFDQELKDLLIEPRQEDLEAREHRFAHPRVRRLRGDIDNRFVFSSSFFSSFPPSMLMEKETKEETEVKFDDKIECILLIHAGKGNHDKLEQLISKEASESESKASIPPSEGEETAHEENGKCEIDNMAEITGEEVDNAQATKSNLDHSSEPDLISVINVERGETSEKLEEPRVPKPQEGDLNLPISSTSATKINDSLYESLSSPVDKNQENITGGPISHTPSCSFASDLQVEVSEVGSPTLTVDENHETTTTTDGESMIYDGDIDKDVTSGSEDMWGASLHLREVRRVSEQDISEVNSWRDICSPLSLQNIDEENAADVSSMSSRSDMPDDTPTYAMSSDHNIFGKDFGTEKGASQPTHSSVVSARWKRLMRLMDTRLNHSPHKMHSEKPGELFNLSENSSKAQVVNDGNNSTASEQDNTHNSRGNEEPGASDAVMQQEATDEVSINSSSSSSPRSVLSITQKTIADQVPSSAYNQETHLDVQQSNMQDVAQEILNGEGPLDSIPQNILPSIDNPNVESHHSDLNHPQEETSPLENSIQESNISSKMNDAEVCNEEAENKLKNDENGGDIFTPLIRQDASREPPRQAEMMASEDISEESREMFDDKVPLISLILESSLESPGEDEEKSEASVRQEATTEPCISAETTDTSSDEDFERKCSDLNENEAILSSSLSAGESDKLREIDKPKHSSGVNYLQSESMQVVEDHMEKEKLDKGDISEDSLLPIATEVTNSEDTEGECDKNEATEQELNKNETVVMSEPAGESDQVRNIAHMKDPEERTST 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 471 485 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 1078 1092 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 860 874 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 747 768 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 838 858 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 546 575 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 1044 1058 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 405 429 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 186 211 - -
Ssu6g2616 1092 Coils Coil 856 876 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 546 566 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 470 532 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 649 672 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 924 967 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 710 768 - -
Ssu6g2616 1092 PANTHER DENTIN SIALOPHOSPHOPROTEIN 51 646 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 979 1001 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 822 909 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 943 957 - -
Ssu6g2616 1092 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 51 646 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 490 532 - -
Ssu6g2616 1092 PANTHER DENTIN SIALOPHOSPHOPROTEIN 641 1091 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 1041 1092 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 890 909 - -
Ssu6g2616 1092 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 641 1091 - -
Ssu6g2616 1092 MobiDBLite consensus disorder prediction 710 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2616 Ssu-Chr6 61248224 61254096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2616 - - gmx:102666693 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2616 6 61248224 61254096 Ssu6g2616 6 61248224 61254096 ECH
Ssu9g1130 9 43081475 43083681 Ssu6g2616 6 61248224 61254096 PCT