Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2585 ATGTCGAAGGTTCTGTTGTGCATGATCCTAGTGCAAGCTATTAGCACTGGGCTTTCGCTACTATCAAGGTTCATAATTGTTCGGGGCACTTTCGTCTTTGCACTCCTTACTTATCGATATATTGTCGCTACCATTTGTCTTATCCCCGTGGTAGTCTTCTTtgaaggGTTTGGCCAGATATTGCCGTTAATTTCGACATGGAAAGTTTGGGCTTTGCTCTTCGTTAATGCATTAACGGGGAAAGCACTCTTATGTTCCTCTggagaaaatatgttaattaatcgAGCTCTCTTTCTGATAATACTAGCATTCTATGGTTTGCGAGACACTTCATCTCCTTACTCTACCACCTTTCTTGGCATGATTCCTATGTTCACCTTCCTTACCTCTATTATATGCAGAGTGGAGCAACCAATGCTGCAAATATGGGCTGGTAGAGCCAAGTTTGTAGGGGTAATTTTGTGTGTTGGGGGAGCATTAGTTGCCAGTCTTTACAAAGGGAAGGAATTTTATATTAGTCATCATAGTCATGACTCTCAAACTGATGTTGTAGTACAAAAAACCAACATGCTTCGTGGCACTATCCTTCTGCTTAGCTGCTGCTTCTCGGCGGCGGAGTGGTTTGTTCTGCAAGGCAAGTTGCTTCAAGTATTTCCGAAGAAGTATTGGGGAATAATGCTACAGTCCGGTATGGCAGTAATCCAATCAGCAATAGTAAGCTTAATCATAGATCACAGTGAAGCTGCTTGGAGATTTGGATGGAATCTACAACTGATCACCATAGTGTATTCGGGAGCACTGGCTTCGGCGGCTGCACTTTGCTTAGTATCTTGGGCAATTAAAGTTAAAGGACCTACTTATCCTACAATGTTCAATCCAATTTCTCTTATTTCGGTGTCCAAAGGGTCTTTCTTTATTGGCGAACCATTAGGAGTTGGAACGTTGCTGGGCATGGTGTTGATCATAATAGGACTATACTTCTTTTGTTGGGGCAAAAAGAATGAGCCACAAAGCCAGACTCAACAAGATGCAGCAGCTGCATCAGTTCCTGAAATTGAAAAAGCAAACAGAAACTAA 1077 0.4132 MSKVLLCMILVQAISTGLSLLSRFIIVRGTFVFALLTYRYIVATICLIPVVVFFEGFGQILPLISTWKVWALLFVNALTGKALLCSSGENMLINRALFLIILAFYGLRDTSSPYSTTFLGMIPMFTFLTSIICRVEQPMLQIWAGRAKFVGVILCVGGALVASLYKGKEFYISHHSHDSQTDVVVQKTNMLRGTILLLSCCFSAAEWFVLQGKLLQVFPKKYWGIMLQSGMAVIQSAIVSLIIDHSEAAWRFGWNLQLITIVYSGALASAAALCLVSWAIKVKGPTYPTMFNPISLISVSKGSFFIGEPLGVGTLLGMVLIIIGLYFFCWGKKNEPQSQTQQDAAAASVPEIEKANRN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2585 358 Pfam EamA-like transporter family 192 328 IPR000620 GO:0016020|GO:0016021
Ssu6g2585 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 333 - -
Ssu6g2585 358 PANTHER WAT1-RELATED PROTEIN 5 348 - -
Ssu6g2585 358 PANTHER WAT1-RELATED PROTEIN 5 348 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2585 Ssu-Chr6 60797036 60802213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2585 6 333 Nodulin-like Gene Family AT1G09380 31.845 7.16e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2585 - - gmx:100782551 371.318