Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2583 ATGGAGGAAAAGAGCAAGAGAGGTTTGAAGGAATGGTTCGCATCATCTCAGGCTCTATTGAGCATGTTACTAGTGCAAGGTTTTGTTACTGGGATGCAGCTACTATCAAGGGTCATATTGGTCAAGGGCTCTTTCATCTTTTCACTCATTGCTTATCGTCATATTGTTGCTGCCGTTTGTGTTGCCCCCTTTGCATTCTACTTTGAAAGAGGCCGCACAATGAATTTTACTCCGAAAGTTTGGTTTTGGCTCTTCGTTAACGCATTGATGGGGATGACTCTGGCTCAAGGACTGTTCTATTATGGTCTGCGAGACACTTCAGCTACTTACGCTGTCAACTTTCTCAACTTGGTTCCTATATGCACATTCTTGACCTCTATCATATGCAGAATGGAGAGATTGGGGCTGCACACTTGGGCTGGTAGAGCTAAGTGTGGAGGGGCAATGTTATGTGTTGGGGGAGCATTATGTACCAGTCTTTACAAAGGGAAGGAATTTTATCTTGGTCATAGTCATCATGGTCAGACTGCTGCTGCAACACACGAAACTCAGATGCTTTGGGGCACTCTCTTCTTGATTTGCAGCTGCCTCTCATACACAGCTTGGTTCATTGTGCAAGTCAAATTGCTTAAGGTATTTCCATTGAGGTATTGGGGAACAATGATAGCATGCGTTTTGGCAACAATTCAAGGAGGAATCATAGGCGTTTGCATAGATTCCAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTGCAACTGGTCACTATAGTGTACTCGGGAGCACTGGCTACGGCTGCTACATTCTGCTTACTATCTTGGGCAATTACAGTCAAAGGACCTAGTTACCCTCCAATGTTCAATCCCCTGGCTCTTATTTTTGTGGCTTTTCCAGAAGCTATCATACTTGGCGAACCATTAAGCGTTGGAACGATGCTGGGCGTGCTTTTGATCATTTTGGGATTGTACTCCTTTTTGTGGGGCAAAAATAATGAGACAATGCGCATGGCTCAACAACCAAATGTAGCAGCTGCAGAAGTATCAAGCATGACTGAATTGCTTGCTGGGGCGCAATCAACGGCCACAGTAATTCCAAGCTCTTCACCTATGAACACTGTTGTAGTTCTAGAACTTGAGAAGTCTgacaaaaactga 1152 0.4401 MEEKSKRGLKEWFASSQALLSMLLVQGFVTGMQLLSRVILVKGSFIFSLIAYRHIVAAVCVAPFAFYFERGRTMNFTPKVWFWLFVNALMGMTLAQGLFYYGLRDTSATYAVNFLNLVPICTFLTSIICRMERLGLHTWAGRAKCGGAMLCVGGALCTSLYKGKEFYLGHSHHGQTAAATHETQMLWGTLFLICSCLSYTAWFIVQVKLLKVFPLRYWGTMIACVLATIQGGIIGVCIDSSKAAWRLEWNLQLVTIVYSGALATAATFCLLSWAITVKGPSYPPMFNPLALIFVAFPEAIILGEPLSVGTMLGVLLIILGLYSFLWGKNNETMRMAQQPNVAAAEVSSMTELLAGAQSTATVIPSSSPMNTVVVLELEKSDKN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2583 383 PANTHER WAT1-RELATED PROTEIN 16 347 - -
Ssu6g2583 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
Ssu6g2583 383 PANTHER WAT1-RELATED PROTEIN 16 347 IPR030184 GO:0016021|GO:0022857
Ssu6g2583 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 152 - -
Ssu6g2583 383 Pfam EamA-like transporter family 26 141 IPR000620 GO:0016020|GO:0016021
Ssu6g2583 383 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2583 Ssu-Chr6 60741266 60749408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2583 19 329 Nodulin-like Gene Family AT1G09380 34.161 1.43e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2583 - - gmx:100808825 614.379