Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2582 ATGGCTTCCTTATGCACTTTCTTCCTCAAATTTTGTCTGTTTAATCTTCTGGCCTCCATAGGGCCATACCCAGTTTCAGTTCATTCAGCTAGTGATGTTCCAATCAATGTGACCAAGCACTTCTACTTCCCTGATTTCAGCTTCAGCAACAACCCCAGACTAGTCCATGATGTGAAGCTCCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTTCAAATCCCCAATGAATCACAAGAGACAGACATAAGACACCAAGCAGGTAGAGGCATCTATTCCTTTCCAATTCGCCTGCTAGATCCAAGCACCAAGACCCCAGCTTCCTTTCATaccatttttacttttcaaatgaACAATTCCACTGCCTCTGAGCAAGCTGCTTATGGAGGAAGTGGCCTCACTTTCATCATTGTCCCTGATGAGTTCACCGTGGGAAGGCCAGGGCCATGGCTTGGCATGCTCAATGATGCTTGTGAGAATGACTACAAGGCAGTGGCAGTGGAGTTTGACACAAGAAAGAACCCAGAGTTTGGAGATCCAAATGACAACCATGTTGGAATCAACTTAGGTACCATAGTATCTACTAAAGTTATCAATGTTTCTGATATTGGAGTGTCCCTTAAGGATGGTTTTTTTCACCGCGCTTGGATCACCTATGATGGTCCTCAAAGGAGAATGGACATTCGTCTTGGACTGGCCAACCAAGAGGATTACCCTTCCAAGCCAATCTTCTCAGAATCTGTGGATCTCTCTCCTTATCTAAATGAGTACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACCACACCCAAATCCACAACATACTCTCTTGGAGCTTCACTTCCACAAGCCAAGCTTTTCTTCGCTTCCCTTCATCTGAAGACTGCCAGGGTAAGATCTTACTTGAGAACAGCACAACACCACCACCAACTTCCGAGAAGTCTTCTAAGAATGAGCCACCGCGAAGCTTTTTGATTTTTGTGGCTGCTGTGGCATTGGCTCTGGCTCTTTTCCTTGGCTTTTACTTCATCAGTAAGCATAGGAGAAATGCTGCCAAGTTGAACACTTCAGTGGAGACAGAGATCGACAGGCCAAGGCCTCCGAACAAGCCACGCCGCTTCACCTTTTCTCAACTTTCATCTTCAACTCGATCATTCAGTGACATAGAATTGCTTGGTAGTGATTCTAGAGGAGTGTACCACAGAGGAAAGCTTTCTAATGGCAGCCAGGTGGCTGTGAAAAGGTTCTCAGCTCAGTTTCTCAACACACACGGATCAGACAAGAGGCGTTTGTTGAAGGAAATCAAAGGCATTAGCCATGTTCGCCACCCGAATTTGCTTCCTGTTAGAGGGTGGTGTCAAGACAACCATGAAATCATGGTGGTCTATGACTTTGTTCCCAATGGCAGCCTGGATAAATGGCTATTTGGGGCCGGTGTTCTTCCGTGGACTCGGCGGTTCAAAGTTATTAAGGATGTAGCTGATGGCTTGAGCTTCCTCCACACTAGGCAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAACTTCAGAGCTGTTTTGGGTGATTTTGGGTTTGTGCTGTTGGGGGCAGAATCAAAACAGTTTGAGTCAGCAGTGTGCCATGGTGCAGATGTGTTTGAGTTTGGTGTCCTTGTGTTGGAAGTGATAGCTGGAAGGATGAGGGAGGAGAAAGAGGGGGGAAATCCAGAAGAGAGGAACCTATTGGATTATGCTTGGAACTTGCATGAGACTGATGAGAAAGTGAAGTTGGTGGACAGAAGGATGGGATCATTGATCAACTTGGAGCAGGCAATTCGTGTTCTCGAAATTGGGTTGCTTTGCACTCTAAATGAGAACAAAGGAAGGCCCTCAATGGAGCAAGTGCTGGCGTTTCTTCTCAACATGGACAAGCCAATTCCTGAGCTGCCAAGAACTCGCCCTGTTGCCTTGTTCCCTTATAATAGCGCCAACACAGGACTTTGCAATGTATATTCTTGCACTTTTTAA 2025 0.4573 MASLCTFFLKFCLFNLLASIGPYPVSVHSASDVPINVTKHFYFPDFSFSNNPRLVHDVKLLGSAKFSNEKGALQIPNESQETDIRHQAGRGIYSFPIRLLDPSTKTPASFHTIFTFQMNNSTASEQAAYGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSTKVINVSDIGVSLKDGFFHRAWITYDGPQRRMDIRLGLANQEDYPSKPIFSESVDLSPYLNEYMFVGFSASTGNHTQIHNILSWSFTSTSQAFLRFPSSEDCQGKILLENSTTPPPTSEKSSKNEPPRSFLIFVAAVALALALFLGFYFISKHRRNAAKLNTSVETEIDRPRPPNKPRRFTFSQLSSSTRSFSDIELLGSDSRGVYHRGKLSNGSQVAVKRFSAQFLNTHGSDKRRLLKEIKGISHVRHPNLLPVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHTRQLAHKNLKCSSVFLDVNFRAVLGDFGFVLLGAESKQFESAVCHGADVFEFGVLVLEVIAGRMREEKEGGNPEERNLLDYAWNLHETDEKVKLVDRRMGSLINLEQAIRVLEIGLLCTLNENKGRPSMEQVLAFLLNMDKPIPELPRTRPVALFPYNSANTGLCNVYSCTF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2582 674 Gene3D - 38 291 - -
Ssu6g2582 674 Gene3D Transferase(Phosphotransferase) domain 1 545 652 - -
Ssu6g2582 674 Gene3D Transferase(Phosphotransferase) domain 1 467 544 - -
Ssu6g2582 674 ProSiteProfiles Protein kinase domain profile. 387 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g2582 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 285 IPR013320 -
Ssu6g2582 674 MobiDBLite consensus disorder prediction 301 320 - -
Ssu6g2582 674 MobiDBLite consensus disorder prediction 357 376 - -
Ssu6g2582 674 SUPERFAMILY Protein kinase-like (PK-like) 365 638 IPR011009 -
Ssu6g2582 674 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Ssu6g2582 674 PANTHER - 28 656 - -
Ssu6g2582 674 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 28 656 - -
Ssu6g2582 674 Gene3D Phosphorylase Kinase; domain 1 357 466 - -
Ssu6g2582 674 CDD lectin_legume_LecRK_Arcelin_ConA 46 284 IPR001220 GO:0030246
Ssu6g2582 674 Pfam Legume lectin domain 40 286 IPR001220 GO:0030246
Ssu6g2582 674 Pfam Protein tyrosine and serine/threonine kinase 393 532 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2582 Ssu-Chr6 60705195 60707219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2582 55 657 Receptor kinase-like Gene Family AT5G55830 32.656 2.36e-94 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu6g2582 PK_Tyr_Ser-Thr 3.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2582 - - gmx:100807767 1195.65