Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2581 ATGCAATGGCTTCCTTATACAATATCTTCCTCATATTTTGTCTGTTTAATCTTCTGGCCTCCATATGGCCATACACAGTTGCAAGTTCATTCAGCTAGTGATGTTCCAAATAGTGTGACCAAGAACTTTTACTTCCCTGATTTTAGCTTCAGCAACAACCCCAGACTTGTCCATGATGTGAAGATACTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTCCAAATCCCCATTGAATCCCAAGACACAGACATAAGACACCAAGCAGTGGCCTCGCTTTCATCATTGTCCCTGATGAGTTCACCTGTGGGAAGGCCAGGGCCATGGCTTGGCATGCTCAATGATGCTTGTGACAATGACTATAAGTTAGTAGCAGTAGAGTTTGACACAAGAAAGAACCCAGAGTTTGGAGATCCAAATGACAACCATGTTGGAATCAACTTAGGTACCATAGCATCTACTAAAGTTATCAATGTTTCTGAAGTTGGAGTGTCCCTTAAGGATGGTTTTGTTCACCGCGCTTGGATCACCTATGATGGTCCTCAAAGGAGAATGGACATTCGTCTTGGACTGGCCAACCAAGAGGATTACCCTTCCAAGCCAATCTTCTCAGAATATGTGGATCTCTCTCCTCATCTAAATGAGTACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACCACACCCAAATCCACAACATACTCTCTTGGAACTTCACTTCCACCAGCCAAGCTTTTCTTCGCTTCCCTTCATCTGATACCTGCCAGGGAAAGATCTTACATGAGAATAGCACAACACCACCAACTTCCAAGAAGTCTGCTAAGAATGAGCTGCCACGAAGCTTTTTGATTTTTGTGGCTGCTGTGGCATTGTCTCTGGCTCTTTTCCTTGGCTTTTACTTCGTCAGTAAGCACAGGAAAAATGCTGCCAAGTTAAACACTTCAGCGGAGACAAAGATTCACAGGCCAAGGCCTCCAAACAAACCACGCCGCTTCACTTTTTCTCAACTTTCTTCTTCAACTCGATCATTCAGTGAGATAGAGTTGCTTGGTAGTGATTCTAGAGGAGCATACTACAGAGGAAAGTTTTGTAATGGCAGCCAGGTAGCTGTGAAAAGGTTCTCATCTCAGTTTCTCAACACGCATGGATCAGACAAGAGGCATTTGTTGAAAGAAATCAAAGGCATTAGCGATGTTCCCCACCCAAATTTGCTTCCTGTTAGAGGGTGGTGTCAAGACAACCATGAGATCATGGTGGTCTATGACTTTGTCCCCAATGGCAGCCTGGATAAATGGCTATTTGGGGCCGGTGTTTTTCAGTGGACTAGGCGGTtcaaagttattaaagatgtagCAGATGGCTTGAGCTTCCTCCACAGTAGGCAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAACTTAAGAGCTGTTTTAGGTGATTTTGGGTTTGTGTTGTTGGGGGCAGAATCAAAACAGTTTGAATCAGCAGTGTGCCAAGATGCAGATGTGTTTGAGTTTGGTGTCCTTGTGTTGGAGTTGATATCTGGAAGGGTAAGGGAGGAGAAAGAGGGGGGAAATCCAGAAGAGAGGAACCTATTGGATTATGCTTGGAACTTGCATGAGACTGATGAGAAAGTGAAGCTGGTGGACCGAAGGATGGAATCATTGATCAACTTGGAGCAGGCAATTCGTGTTCTCGAAATTGGGTTGCTTTGCACTCTAAATGGGAACAAAGGAAGGCCATCAATGGAACAAGTGGTGGAGTTTCTTCTTAACACGGAGAAGCCAATTCCTGAGCTGCCAAGAACTCGCCCTGTTGCCTTGTTCCCCTATAAGAGCGCCAACACAGGACTTTGCAATCATATTCTTACAGCTTTTAAGTGA 1902 0.4432 MQWLPYTISSSYFVCLIFWPPYGHTQLQVHSASDVPNSVTKNFYFPDFSFSNNPRLVHDVKILGSAKFSNEKGALQIPIESQDTDIRHQAVASLSSLSLMSSPVGRPGPWLGMLNDACDNDYKLVAVEFDTRKNPEFGDPNDNHVGINLGTIASTKVINVSEVGVSLKDGFVHRAWITYDGPQRRMDIRLGLANQEDYPSKPIFSEYVDLSPHLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSDTCQGKILHENSTTPPTSKKSAKNELPRSFLIFVAAVALSLALFLGFYFVSKHRKNAAKLNTSAETKIHRPRPPNKPRRFTFSQLSSSTRSFSEIELLGSDSRGAYYRGKFCNGSQVAVKRFSSQFLNTHGSDKRHLLKEIKGISDVPHPNLLPVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVFQWTRRFKVIKDVADGLSFLHSRQLAHKNLKCSSVFLDVNLRAVLGDFGFVLLGAESKQFESAVCQDADVFEFGVLVLELISGRVREEKEGGNPEERNLLDYAWNLHETDEKVKLVDRRMESLINLEQAIRVLEIGLLCTLNGNKGRPSMEQVVEFLLNTEKPIPELPRTRPVALFPYKSANTGLCNHILTAFK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2581 633 MobiDBLite consensus disorder prediction 314 333 - -
Ssu6g2581 633 ProSitePatterns Legume lectins beta-chain signature. 125 131 IPR019825 -
Ssu6g2581 633 Gene3D Phosphorylase Kinase; domain 1 303 424 - -
Ssu6g2581 633 SUPERFAMILY Protein kinase-like (PK-like) 322 596 IPR011009 -
Ssu6g2581 633 Gene3D - 91 250 - -
Ssu6g2581 633 Gene3D Transferase(Phosphotransferase) domain 1 425 499 - -
Ssu6g2581 633 Gene3D Transferase(Phosphotransferase) domain 1 500 613 - -
Ssu6g2581 633 Pfam Protein tyrosine and serine/threonine kinase 349 593 IPR001245 GO:0004672|GO:0006468
Ssu6g2581 633 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 105 614 - -
Ssu6g2581 633 Pfam Legume lectin domain 103 245 IPR001220 GO:0030246
Ssu6g2581 633 CDD lectin_legume_LecRK_Arcelin_ConA 103 243 IPR001220 GO:0030246
Ssu6g2581 633 PANTHER - 105 614 - -
Ssu6g2581 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 244 IPR013320 -
Ssu6g2581 633 ProSiteProfiles Protein kinase domain profile. 345 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2581 Ssu-Chr6 60698680 60700711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2581 39 615 Receptor kinase-like Gene Family AT5G55830 30.048 2.99e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu6g2581 PK_Tyr_Ser-Thr 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2581 - - gmx:100781464 986.482