Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2491 ATGAGGATGGGGGTTTGCGGGTTGAAGGTCGTGTTGGCCATGTTGCTTTGTGGGACCCTTTCATGCACTGCTCAACCGCGTACAGGACTTGCTGCTCTTTTCATCAATATTGCTGTTGAAAATTTTGCTGGTTGGAAGTTTTCGGTGATGTTTGATATAATTCAGAAATCATATATTTCTGGCTTTGTCGTATATGTTCTGATCAACTTGGTTTTGGTGTATTCCTCTGTATATATTATCACACAATTTGCACCAGCAGCTGCTGGATCTGAATTGAGAGAATACAACTTGGATTTTGTGGATGCTGCTATCTTATCTGTTCATGTAGCTCTAGCAAAGGGTATGAACTGGGATGACCTTGCTTGGAAggtgaagaaagagaagaaagttgGAAACCCTGTACCTGGTCTCATCGAAGGTGTTAAAGCTGGACCTGTACGAGCTGAACCCTGCCATGAACAGCGTTGA 468 0.4124 MRMGVCGLKVVLAMLLCGTLSCTAQPRTGLAALFINIAVENFAGWKFSVMFDIIQKSYISGFVVYVLINLVLVYSSVYIITQFAPAAAGSELREYNLDFVDAAILSVHVALAKGMNWDDLAWKVKKEKKVGNPVPGLIEGVKAGPVRAEPCHEQR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2491 155 Gene3D Clc chloride channel 8 115 - -
Ssu6g2491 155 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Ssu6g2491 155 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 27 94 - -
Ssu6g2491 155 SUPERFAMILY Clc chloride channel 28 95 IPR014743 -
Ssu6g2491 155 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2491 Ssu-Chr6 58745321 58748950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2491 28 94 Ion Channels AT5G26240 76.119 3.06e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2491 K05016 - gmx:100811908 106.686