Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2475 ATGGGAAGCGAAGGCGTGAGGAAACCTAGAATCCTATGCCTTCATGGGTTCCGAACAAGCGGAGAAATACTGAAAACACAGATACATAAGTGGCCCCAATCTGTGCTAGACAACCTCGATCTCGTTTTTGTGGATGCTCCTTTTCCTTGCCAAGGCAAATCCGATGTCGAAGGCATTTTTGATCCCCCTTACTACGAGTGGTTCCAGTTCAACAAGGAATTTACAGAGTACACCAACTTTGATGAGTGCCTTCAATATATTGAGGATTGCATGATCAAGCACGGACCTTTTGATGGGCTTCTTGGTTTCTCGCAGGGGGCGATATTATCAGCTGCGCTGCCGGGTCTTCAGGAGAAGGGCGTGGCACTCACGATGATTCCCAAAGTGAAATTCATTATAATAGTAGGAGGGGCAAAGTTTAGGTCACCGTCGGTGGTGGACAAAGCATATTCTTCTCCCGTTAGCTGTCACACCCTTCACTTTCTAGGGGAGACagattttttgaagaaatatgGGGTTGAACTACTAGAATCCTTTGTTGAACCCGTGGTGATTCACCACCCCAAGGGACACACAATACCAAGATTAGACGATAAGAGCTTGAAGACCATGATGGATTTCATCGaaagaattaagaaagatatctga 648 0.4398 MGSEGVRKPRILCLHGFRTSGEILKTQIHKWPQSVLDNLDLVFVDAPFPCQGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLQYIEDCMIKHGPFDGLLGFSQGAILSAALPGLQEKGVALTMIPKVKFIIIVGGAKFRSPSVVDKAYSSPVSCHTLHFLGETDFLKKYGVELLESFVEPVVIHHPKGHTIPRLDDKSLKTMMDFIERIKKDI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2475 215 SUPERFAMILY alpha/beta-Hydrolases 7 211 IPR029058 -
Ssu6g2475 215 Gene3D alpha/beta hydrolase 5 214 IPR029058 -
Ssu6g2475 215 Pfam Serine hydrolase (FSH1) 7 198 IPR005645 -
Ssu6g2475 215 PANTHER DIHYDROFOLATE REDUCTASE 6 214 - -
Ssu6g2475 215 PANTHER ESTERASE OVCA2 6 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2475 Ssu-Chr6 58270482 58275160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2475 2 194 Sulfurtransferasese or Rhodanese AT1G09280 28.251 5.21e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2475 - - gmx:100500670 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2475 6 58270482 58275160 Ssu6g2475 6 58270482 58275160 ECH