Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2431 ATGGGTATATTATGCTGCTTTAAGTCTTCTTTCTCTCAGGTTGTAGCTGCAAGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAGGGGTCAATAAAGTATGGTTTCACCCTAGTGAAAGGGAGAGCTAACCATCCAATGGAGGATTACCATGTTGCAAAGTTTGTGCAGGTGCAGGAAAAAGAATTGGGTTTGTTTGCTATTTATGATGGCCACATGGGAGATACTGTGCCTTCCTACTTACAGAAACATTTGTTTTCCAACATTTTAAAGGAGGAAGAATTTTGGGATAACACTGCCGCATCTATATCGAAAGCATACCACAGCACAGATCAGGAAATTCTTTCGCGTAGTTCTGATTTGGGACACGGTGGATCAACAGCTGTAACTGCAATACTCATCAACGGGCAAAGGTTATGGATAGCTAATGTAGGAGATTCGCGTGCAGTTCTTTCAAGAAAAGGTCAAGCCGTGCAAATGACTACAGACCATGAGCCCAACACAGAACGAGGCATCATTGAGAACAAAGGTGGTTTTGTCTCCAACATACCAGGTGATGTGCCTAGAGTAAATGGGCAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAATCACATTTACGATCAGACCCTGATGTACAGAGTACTGACGTAGATGTTGATATTGACATTCTAATCCTCGCAAGTGATGGACTTTGGAAGGTAATGCCTAATCAAGAGGCAGTGGATATTGCTAGAAGGATGAGAGACCCTTTGAAAGCAGCTAAGCAATTAACAGCCGAAGCGTTAAAAAGAGACAGTAAAGATGATATCTCTTGCGTTGTGGTTAGATTTAGGtgttaa 852 0.4225 MGILCCFKSSFSQVVAASSSSSTGKGKNHEGSIKYGFTLVKGRANHPMEDYHVAKFVQVQEKELGLFAIYDGHMGDTVPSYLQKHLFSNILKEEEFWDNTAASISKAYHSTDQEILSRSSDLGHGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQMTTDHEPNTERGIIENKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQSTDVDVDIDILILASDGLWKVMPNQEAVDIARRMRDPLKAAKQLTAEALKRDSKDDISCVVVRFRC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2431 283 PANTHER PROTEIN PHOSPHATASE 2C 5 282 IPR015655 GO:0004722|GO:0006470
Ssu6g2431 283 CDD PP2Cc 33 281 IPR001932 -
Ssu6g2431 283 Gene3D - 12 283 IPR036457 -
Ssu6g2431 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Ssu6g2431 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Ssu6g2431 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Ssu6g2431 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Ssu6g2431 283 SMART PP2C_4 30 279 IPR001932 -
Ssu6g2431 283 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 5 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2431 Ssu-Chr6 57046953 57049708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2431 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.181 1.15e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2431 K17506 - gmx:100797292 465.692