Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2392 ATGGCTAAGAGGAGTATGGGTATGGTTTCTCCTAATAGAGCACAGGTTCCACAGTATTCCCCTATGGTTAGACAAGGCTCTTTATATAACCTCACCTTTGATGAGGTTCAGAGCCAATTGGGAAACACAGGGAAGCCCCTCCATAGTATGAATTTGGATGAGCTTCATAAAAATGTGATCTCAGCTGAAAGTGGACAACTTGTGCAAGACCCTTCATCGGATCATTCATTTATTCTTGGTAACATTGGTTTGAATGGGACATTGAGCAACAAAACCAATATTAGTGAAGCATGGAGGGGAATTGTTCACCAAGAACACGTGAACAGGTCTGTGGACACCCCCTTGCAACAACCTTGTTTGGGGGAAACAACAACCTTAGAAAATTTCCTAGCCCGTGCAGGTGTGATCAATGTAGGAGACCAAGACAATGTTAATGTTATTGGTGATACTCAGGCCCTGATGGGAATTGACCCAATGGTGCTGCCTTCACAGCGGGAACATTGGTTGCAAATGCAAGTTCCTTCTATTAACATCCACCAACATCAGGAGCAACAGCATCAACAGATAATTGGGTCGTGTGCAGATTTCAATGTTTCCAAGACATTTTATGAGAACCCAGTTATGGAAATCGGTTACTCAGAAAATTCAGTGGGCATTTCAATGTCACCTGCATATTCAGATTCCAAGAGTGCTGTTTTTGGAAAGAACAGGTACTCAGATGAGGTGCTGGAAAAGACTATTGAGAGAAGGCAGAAGAGAATGGCCAAGAACAGAGAATCTGCCGCAAGATCAAGGGCAAAGAAGCAGGTTAGTACAAAGACTCATCAAGCATGCATGCGtaaaggaaaaggaaaggagaatgAGCAAAAATTGCCTAACGAACCAGATCATAGCATTTGCCTAAATGAAGCCCAGTGTGTGCTCCAATTAAAGCGAATATACTATTCTTTGCAAAACAATAATGagtcttttatgtttttgatgGACTCCGATCGAGTAGTTCCGGCGGATTCAACTGCTCATAACAGAAAAGAGGCTTGCTTATTGAGAACTGTGAGAAAAGATtga 1068 0.4092 MAKRSMGMVSPNRAQVPQYSPMVRQGSLYNLTFDEVQSQLGNTGKPLHSMNLDELHKNVISAESGQLVQDPSSDHSFILGNIGLNGTLSNKTNISEAWRGIVHQEHVNRSVDTPLQQPCLGETTTLENFLARAGVINVGDQDNVNVIGDTQALMGIDPMVLPSQREHWLQMQVPSINIHQHQEQQHQQIIGSCADFNVSKTFYENPVMEIGYSENSVGISMSPAYSDSKSAVFGKNRYSDEVLEKTIERRQKRMAKNRESAARSRAKKQVSTKTHQACMRKGKGKENEQKLPNEPDHSICLNEAQCVLQLKRIYYSLQNNNESFMFLMDSDRVVPADSTAHNRKEACLLRTVRKD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2392 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Ssu6g2392 355 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 271 IPR043452 GO:0003700|GO:0045893
Ssu6g2392 355 PANTHER TRANSCRIPTION FACTOR BZIP FAMILY-RELATED 18 271 - -
Ssu6g2392 355 MobiDBLite consensus disorder prediction 254 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2392 Ssu-Chr6 55630094 55634732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2392 6 291 bZIP Transcription Factor Family AT2G41070 37.113 2.24e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2392 K14432 - gmx:100808654 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2392 6 55630094 55634732 Ssu6g2392 6 55630094 55634732 ECH