Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2384 ATGGATCCGAAGAAGCTCGATCACCGCAACGCCGCGAAACTCTTCGAAGACGACGAtccgtcgtcgtcgtcgtcatcGTCGTCGTCGAACGGCTCCTCGTACACGCGCGCGATGGAATTCTACGACCGAGCCAGCTACCGAATCGAGGGAGCGGAGGGCGAGTTCGACCGGATTTGCGGGAGCCTCGGCCTCTCCGGCCCGGAGAACTTCACCATTCCGGCGGAGGCCTGGGAGGCCATCAAGCTTCGCTCCTCGTTCGACATCTTGCCGCGACCGAAGGAGAAAGAGGCCGAGACTAGCCGTTGCTGCaccggcggcggcggcggcgctATTAAGGGTTTTCGGCCTCCGATGCTTAAGCTGCCGCGGGGGAGTTACACGGAGTTGAGTGCTTCTGATGATGATGaccaagaagaagaggaggaggtAGGTGGTGTGAGATTGAAGAGGGAAAAAGAGGAAAATGCGGCGATGATTGAGGAATTTGTTGGGGGGTTTTCGGGGTTTACCACGTCGAACGAAGATGATTCTCCTAGCACTATCACGGATCCCCCATCCAGTAATCCATCTCCCATTGAGAGAATCAAGCATGTTATCACCGCTGGTAACTGGGAGAAGGGTGAGCTTTTGGGGCGTGGTTCTTTTGGCTCTGTTTATGAAGGCATTTCTGTGTAA 675 0.4993 MDPKKLDHRNAAKLFEDDDPSSSSSSSSSNGSSYTRAMEFYDRASYRIEGAEGEFDRICGSLGLSGPENFTIPAEAWEAIKLRSSFDILPRPKEKEAETSRCCTGGGGGAIKGFRPPMLKLPRGSYTELSASDDDDQEEEEEVGGVRLKREKEENAAMIEEFVGGFSGFTTSNEDDSPSTITDPPSSNPSPIERIKHVITAGNWEKGELLGRGSFGSVYEGISV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2384 224 MobiDBLite consensus disorder prediction 92 145 - -
Ssu6g2384 224 MobiDBLite consensus disorder prediction 1 16 - -
Ssu6g2384 224 MobiDBLite consensus disorder prediction 165 193 - -
Ssu6g2384 224 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 41 223 - -
Ssu6g2384 224 MobiDBLite consensus disorder prediction 1 34 - -
Ssu6g2384 224 MobiDBLite consensus disorder prediction 17 34 - -
Ssu6g2384 224 MobiDBLite consensus disorder prediction 166 189 - -
Ssu6g2384 224 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 41 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2384 Ssu-Chr6 55108041 55108715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2384 171 223 MAP Kinase Kinase Kinase AT4G08500 58.491 2.70e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2384 K13414 - gmx:100819177 210.305