Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2341 ATGATGGAGAAAATATGCGGTGCCAGTTTTGGCAATATGTTCAAACAGGCAAAGCCTTATTTGCTAACCGTGGGGTTGCAATTTGGGACGGCTGGAAcactcatcatcattaaggctTGTCTGGACCATGGAATGAGTCGTTTTGTGTTAACTGTCTATCGCAATGTCATTGCTGCGTTTGCCCTTGCTCCTTTTGCGCTTATCTTTGAAAGGAACGTTAGGCCGAAAATGACAACGTCTGTCTTCGTGCAGATAATGGCCCTTGGATTTCTTGAGCCAGTGATTGACCAAAGCTTCACTTGCTTGGGGATGCAATACACTTCGGCTTCATTTGCATCTGCTATTATGAACGCCGTACCTTCTGTAACATTTGTGCTAGCAGTAATCCTCAGGTTAGAGCGTGTAAAGTTGAAGGAGTTACGCAGTCAAGTGAAGGTGATTGGAACCTTGGTAACCTTTGCTGGGGCTTTGTTGATGACACTTTACAAAGGCACCCAAATCAACCTATTTAATCATCCAAACACTACCCACCACAAAGATGAAAGTCATGACTCTCATCAGGGTCATAAACACTGGGTCACAGGGACCCTATTTTTATGCCTTGGTTGTTTGGCTTGGTCCTCCTTTTACATTTTGCAgTCCGTGACAGTGAGAAGGTACCCAGCGGAATTATCACTCTCATCCTTGATATGCTTGACGGGTGCTTTGCAAAGTGCTGTGGTTGCGCTGATTGCAGATCATAACCCTCGGGCATGGGCTATCGGTTTGGACTACAGGCTCTATGGCCCTCTTTATGCTGGAATAATGAGTTCAGGAATAGCATATTATGTACAAGGGCTGGTAATGAAAAGCAGAGGCCCAGTGTTTATGACATCCTTTAATCCTCTATTAATAATCACCGTTGCTACTTTGGGCTCTTTTCTTCTAGGAGAACAGCTCTACTTAGGAAGCGTCATTGGCGCCATCATTATCGTATTGGGTCTTTATTCAGTGGTGTGGGGTAAAGCCAAAGACTATGCATTCGTCACACCACCgtcagcaacaacaacaaaggaGACACAAACACAACAGCTCACAATCAGCTCATAA 1089 0.4307 MMEKICGASFGNMFKQAKPYLLTVGLQFGTAGTLIIIKACLDHGMSRFVLTVYRNVIAAFALAPFALIFERNVRPKMTTSVFVQIMALGFLEPVIDQSFTCLGMQYTSASFASAIMNAVPSVTFVLAVILRLERVKLKELRSQVKVIGTLVTFAGALLMTLYKGTQINLFNHPNTTHHKDESHDSHQGHKHWVTGTLFLCLGCLAWSSFYILQSVTVRRYPAELSLSSLICLTGALQSAVVALIADHNPRAWAIGLDYRLYGPLYAGIMSSGIAYYVQGLVMKSRGPVFMTSFNPLLIITVATLGSFLLGEQLYLGSVIGAIIIVLGLYSVVWGKAKDYAFVTPPSATTTKETQTQQLTISS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2341 362 PANTHER WAT1-RELATED PROTEIN 13 356 - -
Ssu6g2341 362 Pfam EamA-like transporter family 20 160 IPR000620 GO:0016020|GO:0016021
Ssu6g2341 362 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020|GO:0016021
Ssu6g2341 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Ssu6g2341 362 PANTHER WAT1-RELATED PROTEIN 13 356 IPR030184 GO:0016021|GO:0022857
Ssu6g2341 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2341 Ssu-Chr6 53385777 53392408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2341 12 341 Nodulin-like Gene Family AT2G37460 48.943 4.47e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2341 - - gmx:100812238 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2341 6 53385777 53392408 Ssu6g2341 6 53385777 53392408 ECH