Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu6g2275 | ATGTCGAAGACGAAGGCATTCCAAGGCGCGAACGTGTTCATGTCGCGAAACCTTGTGCCGCCTGAAGTCTTCGACGCGCTACATGACGCCGTCAAAGATAACGGCGCTCAAATCCACCTTTGCTGCGACCCTTTCCGTAACGGCCCCGACGATTACCACATCATCTCTTCCAGGAAACACGTAATTAATTCCTCACTTCTACTCTTGTTTTccctctttctcttattttttctgATTCCTATCTCCGCGTCGCAGGAGAAGTTCGACGATCTTAAATCCAAGGGCTGTAAATTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCCAAAGCCGGAAGGCCTCTGCCTAAACAAGGCTTCACTTGTTGCCTTGCCATGGAAGGCGTCAAAGTACTTGCGTCTGGCTTTGATATGGATGAGAAGGTTAAGATAGAAGAGTTAGTGGCTGAAATGGGGGGAGTTCTACACATTAAAGCATCATTGGATTTGAACTTTGTCATTGTGAAGAATGTTTTAGCTGCAAAGTACAAGTGGGCTTTGAATATATTGAAGAAACCAATAGTCACTTATGAATGGTTGAAACAATGCTCAGATGAGCATCGTGTTGttcctcaagagtcatacaagGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATCCCAGCAGATAAGCGTAAAGAGATGGAGAAGCTTATTATAAGAACTGAGATTCATTTAGACAAGAATTCAGCTCCTGAAGGTGATAAATATAAGGTGGCAAAACGATGGGGCCACATTCTTATTGTGACAAGGAAATGGTTTGATCAATCTATTGCTCGAAGAGCATGTCTGAATGAGGAGTCCTTCCCTGTTCAGCATGAATCTGTATCTTCACATAAAGTAACTAGGGACTTAACAATGCAACATAGCCAAGAAAAGGATATTGGGAAATTGCAATCCGCGACATCCTCAGGTGCTACAGATTCAAATATGCAAGTTTTTTCTTATGTTGAGTATATGGATAGAGATCTAGAAGCTACACAGTCCTCTGTTCCAAATGCTCCTTTATTTGTTAAAGAGGAAGATGCTGAACCTCCTCCGTTGCAGACCAGCAATGAATTGAACTTTGATGGTGCTGTTGCCAATGATTCTGAATCTGATGATAATGATCTTTACTTATCAGAGTGCAGAATATTACTAGTTGGTTTTGAAGCTTGTGAAATGCGGAAACTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGGTATATGTCTTTTAATGACAAATTGACACACATAGTAATTGGGAATCCTACTGAAATGGAAAAGAAGGATGTGAGGAGTCTTGCTGCTTTGGGTGTAATTTCTGTTGTCAAAACTGTATGGCTTGAAGATTGTGACCGTGAAAAGAAAGAAGTCCCTGTTCTTAGGCGACACATTGCATATGATCTGCTTCATCCAAAAGCAAGCTTGGTAAAAGGAGTAACAGGCAGTATGTCTATGGATCACGGTAAAAGCTCCAGCTTTCATCAAAGCTTACAGAGTGATCAGGGGGGCTTTGAAATTCTAAAGCCAGAATCtttggagaaaagaaaagaggaaacaTATACGGGTATATATGGTCACTCATTCAGTAAAACAATAGGCAGAACTATGCTGCAAAATCAACTTCCTGATAATAAATTGAGGACACAAAGGATGACCCAACATGACTCCACTGTTCAATACGCGAAGTCAGCAAATGTTTTCAGAGGGAAactattttgtttctcaaatttatttccTGAAGAAAGGAGGGCTGAGATTGTTCAATGGATAAGTCAAGGGGGAGGACAGATAATAAGTGGGCAAACAAAACAGAGTGTCCACTATACTATTGAGAGTCATGGTGTAACACCCATGTTGACAGGTGGTTCCAAGAGTTTGTATATTTCCAGTCATTGGATACGATCTTGTTTGGAGGCTGGATCCTTGCTGGATGTTGACAGTCACATTCTTTATTCTCCACTTCCCTGCCGTGTTCCCTTGCTTGGGTTTGAAAGCTTCCGGTTTTGTGTTTCACAGTATGAGGAGAAAGACAGAATTCTCCTAAGGAACTTGTGTTTTGTTCTGGGAGCTAAATTTGTGGAGAAGTTGACTAAGAAGGTCACCCATTTATTGTGTAAATTCACCAATGGGCCCAAGTATGAGGCTGCTTGTAGATGGGGGATCCAATCAGTTACATCGGAATGGATTTTTGAATGCGTCAAACAGaatGGAGTTGTTGCCATTGATCAATTTTTACCAAAAGAAGTCACTGCTCAAGACCGAGAGGCAGGAATTTGCACTGTGAGTCAATTTCCCACCCAGGCTGTTCAAATAAGTGACATGCCCTCCCAGTTGTCAAGTCAATCACATACTTCAGGAAGCACGGCAAGTAAAAATGTCGGTTGTGGAGTTGATAATCACGAGACCAATTTTAGGATACCAAGTATTTATAGCAAAAAGGCAAGGCTTGTGGAGGAACCTTGCCCATCCAATAAGACGCCTTTGGCATCAAATTCAGGTATCCATGCCTATGAGAAGAATTTTTCCGAAGACAATATGGTTCTAGATGTTGGGGAGGTTTGTCATGCTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATGCATGATCAGCGGTCCCCAGTGCAGACAGGGTGTGAGAGAAGTATTTACCCATCTGATCGTTCAGTCCTTGGTGAAGATAATTCCAATCCTCATACTGTCTTTGGATTATCTAAACACTGGTTAGACAGAAGTGGCAGAAAAGATGATAATGGGGAGGCTTCTCAAGACAGAAGAGCAGGAATATATGATGGTTTTAGTGAAACGCAGACAGAATCTCAGGTTGTTGGTTATGAAGAAGATTTATCAGGAAGGCAAATGCTTATAGATAGAGTCCGAACTCGAAGTAGCTTGCagtga | 2952 | 0.4085 | MSKTKAFQGANVFMSRNLVPPEVFDALHDAVKDNGAQIHLCCDPFRNGPDDYHIISSRKHVINSSLLLLFSLFLLFFLIPISASQEKFDDLKSKGCKLLGPRCVLSCAKAGRPLPKQGFTCCLAMEGVKVLASGFDMDEKVKIEELVAEMGGVLHIKASLDLNFVIVKNVLAAKYKWALNILKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLKICVTGIPADKRKEMEKLIIRTEIHLDKNSAPEGDKYKVAKRWGHILIVTRKWFDQSIARRACLNEESFPVQHESVSSHKVTRDLTMQHSQEKDIGKLQSATSSGATDSNMQVFSYVEYMDRDLEATQSSVPNAPLFVKEEDAEPPPLQTSNELNFDGAVANDSESDDNDLYLSECRILLVGFEACEMRKLVNMVRKGGGSRYMSFNDKLTHIVIGNPTEMEKKDVRSLAALGVISVVKTVWLEDCDREKKEVPVLRRHIAYDLLHPKASLVKGVTGSMSMDHGKSSSFHQSLQSDQGGFEILKPESLEKRKEETYTGIYGHSFSKTIGRTMLQNQLPDNKLRTQRMTQHDSTVQYAKSANVFRGKLFCFSNLFPEERRAEIVQWISQGGGQIISGQTKQSVHYTIESHGVTPMLTGGSKSLYISSHWIRSCLEAGSLLDVDSHILYSPLPCRVPLLGFESFRFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYEAACRWGIQSVTSEWIFECVKQNGVVAIDQFLPKEVTAQDREAGICTVSQFPTQAVQISDMPSQLSSQSHTSGSTASKNVGCGVDNHETNFRIPSIYSKKARLVEEPCPSNKTPLASNSGIHAYEKNFSEDNMVLDVGEVCHAVPDVAAAIEDLLEQTSKMHDQRSPVQTGCERSIYPSDRSVLGEDNSNPHTVFGLSKHWLDRSGRKDDNGEASQDRRAGIYDGFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSLQ | 983 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu6g2275 | 983 | Gene3D | BRCT domain | 122 | 210 | IPR036420 | - | |
| Ssu6g2275 | 983 | CDD | BRCT_TopBP1_rpt2_like | 211 | 276 | - | - | |
| Ssu6g2275 | 983 | SUPERFAMILY | BRCT domain | 208 | 285 | IPR036420 | - | |
| Ssu6g2275 | 983 | SUPERFAMILY | BRCT domain | 673 | 758 | IPR036420 | - | |
| Ssu6g2275 | 983 | Pfam | BRCA1 C Terminus (BRCT) domain | 126 | 195 | IPR001357 | - | |
| Ssu6g2275 | 983 | PANTHER | DNA REPLICATION REGULATOR DPB11-RELATED | 7 | 971 | - | - | |
| Ssu6g2275 | 983 | ProSiteProfiles | BRCT domain profile. | 383 | 475 | IPR001357 | - | |
| Ssu6g2275 | 983 | SMART | BRCT_7 | 209 | 276 | IPR001357 | - | |
| Ssu6g2275 | 983 | SMART | BRCT_7 | 122 | 199 | IPR001357 | - | |
| Ssu6g2275 | 983 | SMART | BRCT_7 | 385 | 465 | IPR001357 | - |
Showing 1 to 10 of 30 entries
Functional genes information
Pathway information