Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2271 ATGCAACAATGCTTAACTATTAGCACACTACCTGCAAGAAAGATCCCAAGAGCTGATAAGAGAATGCAGTTATATCATCATCCGTTGGATTTGGACAGCCAGAAGGTGAGACTTGCATTGGAGGAGGAGGGTCTAGATTATACATCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCTTTCTTCAAGATGAATCGCCGTGGAAGGCTCCCGGTTTTCCAAAATGGCTCTCACATCATTTACAATACTGTTGATATAATCCAGTACATAGAAAGAATTGCTGCGGTTTCCTCAGGGGCTGAGAGTATCGGTGCCAGTAGCAGGGAAGTGATTGAATGGATGCAGAGGATACAAGAGTGGGATCCCAAGTTTTTCACACTTTCACATATACCCGAGAAATATCGCCTTTATGTTTCCAAGTTCATGAGGCAAGTGGTGATTGCTCGCATGTCTGAGTCACCTGATTTAGCAGGAGATTACCATAAGAAGTTGAGAGAAGCCTATGAGACTGAAGAGAGATTGAAAGAAGCAGATGTTTTGAGAAGTAGCAAGGGGCATTTGGTTAGACTGCTTGATGAGGTGGAGAGGCAGCTCAGTGAAACACCTTATTTGGCAGGTCAAGAGTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTGAAACTCTTGGATTTAGAGAATGAGTACATAGCTGGAAGGCCAAACATTGCTGAGTACTGGCTTTTGGTTCAGCTGAGGCCTAGTTATAAAAGGGTGATTGGTAAGTACTTTAGTGGTTGGAGAAAGCACAAAACACTATTAAAAACATGGTGCTTAGTTCGTATTAGAAGTTTGCTGAAAAGGTACTAG 867 0.4256 MQQCLTISTLPARKIPRADKRMQLYHHPLDLDSQKVRLALEEEGLDYTSYHVNPITGKNLDSSFFKMNRRGRLPVFQNGSHIIYNTVDIIQYIERIAAVSSGAESIGASSREVIEWMQRIQEWDPKFFTLSHIPEKYRLYVSKFMRQVVIARMSESPDLAGDYHKKLREAYETEERLKEADVLRSSKGHLVRLLDEVERQLSETPYLAGQEFTMADVMLIPVLARLKLLDLENEYIAGRPNIAEYWLLVQLRPSYKRVIGKYFSGWRKHKTLLKTWCLVRIRSLLKRY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2271 288 Pfam Glutathione S-transferase, C-terminal domain 187 245 - -
Ssu6g2271 288 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Ssu6g2271 288 SUPERFAMILY GST C-terminal domain-like 180 262 IPR036282 -
Ssu6g2271 288 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 142 272 IPR010987 -
Ssu6g2271 288 CDD GST_C_family 189 246 - -
Ssu6g2271 288 Gene3D - 163 259 - -
Ssu6g2271 288 SFLD Glutathione Transferase (cytosolic) 22 246 IPR040079 -
Ssu6g2271 288 CDD GST_N_family 22 94 - -
Ssu6g2271 288 Pfam Glutathione S-transferase, N-terminal domain 33 97 IPR004045 -
Ssu6g2271 288 Gene3D Glutaredoxin 16 96 - -
Ssu6g2271 288 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 22 288 IPR044617 GO:0004364
Ssu6g2271 288 SUPERFAMILY Thioredoxin-like 18 96 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2271 Ssu-Chr6 51065895 51067143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2271 22 288 Glutathione S-transferase Gene Family AT1G77290 68.914 2.92e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2271 K22077 - gmx:100808461 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2271 6 51065895 51067143 Ssu6g2271 6 51065895 51067143 ECH